RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 AAED1Q7RTV5 226 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 RPP25LQ8N5L8 163 aaKnown RBP1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 WFDC11Q8NEX6 87 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ZNF714Q96N38 554 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 YPEL2Q96QA6 119 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 Q9BRP9 147 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 AGPAT4-IT1Q9H0P7 198 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 XAGE1AQ9HD64 81 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 RNF11Q9Y3C5 154 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 HLA-DRB4X5D2U9 266 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 MALRD1Q5VYJ5 2156 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 HFM1A2PYH4 1435 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 RTEL1-TNFRSF6BF6WH68 1400 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 KDM6AO15550 1401 aaPredicted RBP1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 SYNJ1O43426 1573 aa1.46□□□□□ -2.18
SHCBP1-202ENST00000563219 ABCC3O15438 1527 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 ZC3H13Q5T200 1668 aaKnown RBP1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 ERVK-7P63135 1459 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 MAGI2Q86UL8 1455 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 PLEKHH2Q8IVE3 1493 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 N4BP2Q86UW6 1770 aaPredicted RBP1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 TRBV20-1A0A075B6N2 111 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 IGHV3-64A0A075B6Q5 118 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 A0A0D9SEW6 157 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 TRBV27A0A0K0K1C4 114 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 HMSDA8MTL9 139 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 MCRIP1C9JLW8 97 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 K7EP34 96 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 TMEM256-PLSCR3K7ERE1 68 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 M0R129 80 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 YPEL1O60688 119 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 HIST1H2BKO60814 126 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 SLC25A5P05141 298 aaKnown RBP1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 HIST1H2BJP06899 126 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 CXCL1P09341 107 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 CRYGAP11844 174 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 ASIPP42127 132 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 SNRPD3P62318 126 aaKnown RBP1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 UNQ5815/PRO19632Q6UWF5 114 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 TMEM91Q6ZNR0 172 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 TEN1Q86WV5 123 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 LINC00311Q8N616 119 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 LINC00301Q8NCQ3 95 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 DCANP1Q8TF63 244 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 TSLPQ969D9 159 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 S100A16Q96FQ6 103 aaKnown RBP1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 LINC00526Q96FQ7 95 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 ZC2HC1AQ96GY0 325 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 PRELID3AQ96N28 172 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 HIST1H2BLQ99880 126 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 NPVFQ9HCQ7 196 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 EPDR1Q9UM22 224 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 SERP1Q9Y6X1 66 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 COL4A2P08572 1712 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 BAHCC1Q9P281 2608 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 ADGRB3O60242 1522 aa1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 ZFHX2Q9C0A1 2572 aaPredicted RBP1.45□□□□□ -2.18
SHCBP1-202ENST00000563219 RBBP6Q7Z6E9 1792 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 UBR2Q8IWV8 1755 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 TMEM131LA2VDJ0 1609 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 NEO1Q92859 1461 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 SCAF11Q99590 1463 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 ARAP2Q8WZ64 1704 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 LRRIQ1Q96JM4 1722 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 PIGBOS1A0A0B4J2F0 54 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 OOSP1A8MZH6 123 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 BUB1B-PAK6H3BSN5 160 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 M0R2P5 195 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 GNGT2O14610 69 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 PITX3O75364 302 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 NDUFB6O95139 128 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 HBDP02042 147 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 CD3DP04234 171 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 ZNF80P51504 273 aaPredicted RBP1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 DYNLT3P51808 116 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 NPC2P61916 151 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 MRPS36P82909 103 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 CDK5R1Q15078 307 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 TPRXLQ17RH7 258 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 KIAA2026Q5HYC2 2103 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 Q6ZTI0 123 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 C10orf111Q8N326 155 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 ATP6V0E2Q8NHE4 81 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 OTOSQ8NHW6 89 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 VSTM2AQ8TAG5 236 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 STAG3L4Q8TBR4 150 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 ZCCHC13Q8WW36 166 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 POP5Q969H6 163 aaKnown RBP1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 NPCDR1Q9BY65 106 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 ST20Q9HBF5 79 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 RABAC1Q9UI14 185 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 LMTK2Q8IWU2 1503 aa1.44□□□□□ -2.18
SHCBP1-202ENST00000563219 FER1L6Q2WGJ9 1857 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 GBF1Q92538 1859 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 SUPT6HQ7KZ85 1726 aaKnown RBP1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 ABCA3Q99758 1704 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 ATG2AQ2TAZ0 1938 aa1.43□□□□□ -2.18
SHCBP1-202ENST00000563219 IGLC7A0M8Q6 106 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms