RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 IFNA1P01562 189 aa11.26□□□□□ -0.61
USB1-208ENST00000563207 GPX1P07203 203 aa11.26□□□□□ -0.61
USB1-208ENST00000563207 GNG5P63218 68 aa11.26□□□□□ -0.61
USB1-208ENST00000563207 TEX261Q6UWH6 196 aa11.26□□□□□ -0.61
USB1-208ENST00000563207 C1orf158Q8N1D5 194 aa11.26□□□□□ -0.61
USB1-208ENST00000563207 TMEM75Q8N9X5 138 aa11.26□□□□□ -0.61
USB1-208ENST00000563207 H7BYZ3 331 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 PEX7O00628 323 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 CCL20P78556 96 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 GFI1BQ5VTD9 330 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 LGALS9CQ6DKI2 356 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 LYPD6BQ8NI32 183 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 NDFIP1Q9BT67 221 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 GNG13Q9P2W3 67 aa11.25□□□□□ -0.61
USB1-208ENST00000563207 FLI1Q01543 452 aaPredicted RBP11.24□□□□□ -0.61
USB1-208ENST00000563207 ZNF767PQ75MW2 155 aa11.24□□□□□ -0.61
USB1-208ENST00000563207 ZFAND2AQ8N6M9 145 aa11.24□□□□□ -0.61
USB1-208ENST00000563207 NIPSNAP3BQ9BS92 247 aa11.24□□□□□ -0.61
USB1-208ENST00000563207 PSG8Q9UQ74 426 aa11.24□□□□□ -0.61
USB1-208ENST00000563207 IGHV3OR16-12A0A075B7B8 117 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 C7orf71A4D174 169 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 TMEM189A5PLL7 270 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 C11orf94C9JXX5 98 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 S100A9P06702 114 aaKnown RBP11.23□□□□□ -0.61
USB1-208ENST00000563207 ATP5G3P48201 142 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 TAS2R60P59551 318 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 RRN3P1Q2M238 152 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 SAPCD1Q5SSQ6 148 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 ZNF680Q8NEM1 530 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 Q8TAT8 98 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 FMC1Q96HJ9 113 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 LINC01587Q99440 93 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 CELA1Q9UNI1 258 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
USB1-208ENST00000563207 TRAV8-1A0A0A6YYK1 113 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 IGLL5B9A064 214 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 IGLV2-11P01706 119 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 RNASE4P34096 147 aaKnown RBP11.22□□□□□ -0.61
USB1-208ENST00000563207 KIR3DS1Q14943 382 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 Q6ZTC4 211 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 C2CD4CQ8TF44 421 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 PYGO2Q9BRQ0 406 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 TREM1Q9NP99 234 aa11.22□□□□□ -0.61
USB1-208ENST00000563207 TRAV12-3A0A0B4J271 114 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 TRBV6-1A0A0K0K1D8 114 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 J3KRW8 73 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 PDE6DO43924 150 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 ZNF324O75467 553 aaPredicted RBP11.21□□□□□ -0.61
USB1-208ENST00000563207 BCL2P10415 239 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 MEF2BQ02080 365 aaPredicted RBP11.21□□□□□ -0.61
USB1-208ENST00000563207 ZNF493Q6ZR52 646 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 LINC00467Q9BRT7 94 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 VAX2Q9UIW0 290 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 ZFP30Q9Y2G7 519 aa11.21□□□□□ -0.61
USB1-208ENST00000563207 DNAH6Q9C0G6 4158 aa11.2□□□□□ -0.62
USB1-208ENST00000563207 UBE2G1P62253 170 aa11.2□□□□□ -0.62
USB1-208ENST00000563207 BTN1A1Q13410 526 aa11.2□□□□□ -0.62
USB1-208ENST00000563207 TMEM183BQ1AE95 376 aa11.2□□□□□ -0.62
USB1-208ENST00000563207 Q6AWC8 147 aa11.2□□□□□ -0.62
USB1-208ENST00000563207 PRNTQ86SH4 94 aa11.2□□□□□ -0.62
USB1-208ENST00000563207 AKR1C3P42330 323 aa11.19□□□□□ -0.62
USB1-208ENST00000563207 SMUG1Q53HV7 270 aa11.19□□□□□ -0.62
USB1-208ENST00000563207 C11orf52Q96A22 123 aa11.19□□□□□ -0.62
USB1-208ENST00000563207 TVP23CQ96ET8 276 aa11.19□□□□□ -0.62
USB1-208ENST00000563207 C16orf74Q96GX8 76 aa11.19□□□□□ -0.62
USB1-208ENST00000563207 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
USB1-208ENST00000563207 LINC00479Q96M42 142 aa11.19□□□□□ -0.62
USB1-208ENST00000563207 TRAV34A0A0B4J273 112 aa11.18□□□□□ -0.62
USB1-208ENST00000563207 TRAV21A0A0B4J279 112 aa11.18□□□□□ -0.62
USB1-208ENST00000563207 TEX48A0A1B0GUV7 120 aa11.18□□□□□ -0.62
USB1-208ENST00000563207 LOC102723971A0A1B0GUV8 181 aa11.18□□□□□ -0.62
USB1-208ENST00000563207 NDUFS6O75380 124 aaKnown RBP11.18□□□□□ -0.62
USB1-208ENST00000563207 C12orf74Q32Q52 190 aa11.18□□□□□ -0.62
USB1-208ENST00000563207 PRR9Q5T870 116 aa11.18□□□□□ -0.62
USB1-208ENST00000563207 COX8CQ7Z4L0 72 aa11.18□□□□□ -0.62
USB1-208ENST00000563207 TMEM263Q8WUH6 116 aaKnown RBP11.18□□□□□ -0.62
USB1-208ENST00000563207 SCO2A0A1W2PP80 73 aa11.17□□□□□ -0.62
USB1-208ENST00000563207 RBFOX3A6NFN3 312 aa11.17□□□□□ -0.62
USB1-208ENST00000563207 ZNF705GA8MUZ8 300 aaPredicted RBP11.17□□□□□ -0.62
USB1-208ENST00000563207 ANXA2RQ3ZCQ2 193 aa11.17□□□□□ -0.62
USB1-208ENST00000563207 Q86TA4 180 aa11.17□□□□□ -0.62
USB1-208ENST00000563207 EIF4E3Q8N5X7 224 aaKnown RBP11.17□□□□□ -0.62
USB1-208ENST00000563207 IGHV1OR15-1A0A075B7D0 117 aa11.16□□□□□ -0.62
USB1-208ENST00000563207 RGS13O14921 159 aa11.16□□□□□ -0.62
USB1-208ENST00000563207 LTAP01374 205 aa11.16□□□□□ -0.62
USB1-208ENST00000563207 HTN1P15515 57 aa11.16□□□□□ -0.62
USB1-208ENST00000563207 DNAH2Q9P225 4427 aa11.16□□□□□ -0.62
USB1-208ENST00000563207 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 GCGP01275 180 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 PFN1P07737 140 aaKnown RBP11.15□□□□□ -0.62
USB1-208ENST00000563207 SPART-AS1P0CW21 52 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 TDRG1Q3Y452 100 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 ZNF506Q5JVG8 444 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 FAM159AQ6UWV7 190 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 TMEM183AQ8IXX5 376 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 RNASE8Q8TDE3 154 aaKnown RBP11.15□□□□□ -0.62
USB1-208ENST00000563207 FAM210AQ96ND0 272 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 C8orf49Q96NF6 230 aa11.15□□□□□ -0.62
USB1-208ENST00000563207 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 138.9 ms