RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 ZFAND6Q6FIF0 208 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 ZFAND2AQ8N6M9 145 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 C11orf45Q8TAV5 145 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 TMED6Q8WW62 240 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
CNOT1-204ENST00000563130 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
CNOT1-204ENST00000563130 A0A1W2PRE2 83 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 PLAC8L1A1L4L8 177 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 TMEM189A5PLL7 270 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 H7BYZ3 331 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 PFDN1O60925 122 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 HBE1P02100 147 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 PRM2P04554 102 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 TPT1P13693 172 aaKnown RBP4.43□□□□□ -1.7
CNOT1-204ENST00000563130 LEPP41159 167 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 RRN3P1Q2M238 152 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 FAM74A1Q5RGS3 127 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 TMEM78Q5T7P6 136 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 C9orf62Q8N4C0 152 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 TMEM208Q9BTX3 173 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 CELA1Q9UNI1 258 aa4.43□□□□□ -1.7
CNOT1-204ENST00000563130 MAP1LC3B2A6NCE7 125 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 GGTLC3B5MD39 225 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 ZNF324O75467 553 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-204ENST00000563130 ZNF138P52744 262 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 TAS2R60P59551 318 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 NANOS2P60321 138 aaKnown RBP4.42□□□□□ -1.7
CNOT1-204ENST00000563130 DPPA3Q6W0C5 159 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 C5orf17Q8NAS9 161 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 MBD3L1Q8WWY6 194 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 LINC01587Q99440 93 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 MAP1LC3BQ9GZQ8 125 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 TMPRSS5Q9H3S3 457 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 DKK2Q9UBU2 259 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 LENEPQ9Y5L5 61 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 ZNF705GA8MUZ8 300 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-204ENST00000563130 TCRAP04437 139 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 AZU1P20160 251 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 FGF8P55075 233 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-204ENST00000563130 C12orf74Q32Q52 190 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 PRR9Q5T870 116 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 CEMP1Q6PRD7 247 aaPredicted RBP4.42□□□□□ -1.7
CNOT1-204ENST00000563130 Q8TAT8 98 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 CMTM2Q8TAZ6 248 aa4.42□□□□□ -1.7
CNOT1-204ENST00000563130 RNASE8Q8TDE3 154 aaKnown RBP4.42□□□□□ -1.7
CNOT1-204ENST00000563130 YTHDF2Q9Y5A9 579 aaKnown RBP4.42□□□□□ -1.7
CNOT1-204ENST00000563130 TRAV12-3A0A0B4J271 114 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 SERTM2A0A1B0GWG4 89 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 C7orf71A4D174 169 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 CXorf65A6NEN9 183 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 NUPR2A6NF83 97 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 IGLV2-11P01706 119 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 SPART-AS1P0CW21 52 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 GNG5P63218 68 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 BTN1A1Q13410 526 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 FAM222AQ5U5X8 452 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 ZNF493Q6ZR52 646 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 GOLT1AQ6ZVE7 132 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 SLC51BQ86UW2 128 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 PHLDA1Q8WV24 401 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-204ENST00000563130 TVP23CQ96ET8 276 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 PYGO2Q9BRQ0 406 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 LINC00467Q9BRT7 94 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 NKX6-2Q9C056 277 aaPredicted RBP4.41□□□□□ -1.7
CNOT1-204ENST00000563130 EPDR1Q9UM22 224 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 SACSQ9NZJ4 4579 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 TRAV8-1A0A0A6YYK1 113 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 TEX48A0A1B0GUV7 120 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 FAM74A7A6NL05 159 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 C11orf94C9JXX5 98 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 GPX1P07203 203 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 TAGLN2P37802 199 aaKnown RBP4.41□□□□□ -1.7
CNOT1-204ENST00000563130 RAB5CP51148 216 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 EMP1P54849 157 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 ZFP69Q49AA0 526 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 Q6AWC8 147 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 EIF5AL1Q6IS14 154 aaKnown RBP4.41□□□□□ -1.7
CNOT1-204ENST00000563130 Q6ZTC4 211 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 TMEM263Q8WUH6 116 aaKnown RBP4.41□□□□□ -1.7
CNOT1-204ENST00000563130 C16orf74Q96GX8 76 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 NIPSNAP3BQ9BS92 247 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 KRTAP9-4Q9BYQ2 154 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 ARL2-SNX15V9GYD0 113 aa4.41□□□□□ -1.7
CNOT1-204ENST00000563130 LYSTQ99698 3801 aa4.4□□□□□ -1.7
CNOT1-204ENST00000563130 RYR3Q15413 4870 aa4.4□□□□□ -1.7
CNOT1-204ENST00000563130 TRAV1-1A0A0B4J248 108 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 RNASE4P34096 147 aaKnown RBP4.4□□□□□ -1.71
CNOT1-204ENST00000563130 SULT1A2P50226 295 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 Q6ZQT7 251 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 NHLRC2Q8NBF2 726 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 FAM213BQ8TBF2 198 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 SFT2D1Q8WV19 159 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 ATG101Q9BSB4 218 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 RPH3ALQ9UNE2 315 aa4.4□□□□□ -1.71
CNOT1-204ENST00000563130 CHTOPQ9Y3Y2 248 aaKnown RBP4.4□□□□□ -1.71
CNOT1-204ENST00000563130 FBLL1A6NHQ2 334 aaKnown RBP4.39□□□□□ -1.71
CNOT1-204ENST00000563130 LYRM9A8MSI8 78 aa4.39□□□□□ -1.71
CNOT1-204ENST00000563130 HTN1P15515 57 aa4.39□□□□□ -1.71
CNOT1-204ENST00000563130 TIRAPP58753 221 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms