RNA–Protein interactions for RNA: ENST00000563010.1

CSK-204, Transcript of C-terminal Src kinase, human

TSL 2

Gene CSK, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSK-204	ENST00000563010	C8orf49	Q96NF6	230 aa		10.5	□□□□□ -0.73
CSK-204	ENST00000563010	MLST8	Q9BVC4	326 aa		10.5	□□□□□ -0.73
CSK-204	ENST00000563010	CTDSP1	Q9GZU7	261 aa		10.5	□□□□□ -0.73
CSK-204	ENST00000563010	SAV1	Q9H4B6	383 aa	Predicted RBP	10.5	□□□□□ -0.73
CSK-204	ENST00000563010	LENEP	Q9Y5L5	61 aa		10.5	□□□□□ -0.73
CSK-204	ENST00000563010		A0A087WWC5	75 aa		10.49	□□□□□ -0.73
CSK-204	ENST00000563010	SCO1	O75880	301 aa		10.49	□□□□□ -0.73
CSK-204	ENST00000563010	ACTL10	Q5JWF8	245 aa		10.49	□□□□□ -0.73
CSK-204	ENST00000563010	ZC2HC1A	Q96GY0	325 aa		10.49	□□□□□ -0.73
CSK-204	ENST00000563010	KNCN	A6PVL3	124 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	ZNF705G	A8MUZ8	300 aa	Predicted RBP	10.48	□□□□□ -0.73
CSK-204	ENST00000563010	GATC	O43716	136 aa	Known RBP	10.48	□□□□□ -0.73
CSK-204	ENST00000563010	IGKV3-20	P01619	116 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010		P01737	135 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	LEP	P41159	167 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	KRTAP10-11	P60412	298 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	ODF3L2	Q3SX64	289 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	FAM162B	Q5T6X4	162 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	GDF5OS	Q5U4N7	250 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	GTSCR1	Q86UQ5	136 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	RNASE7	Q9H1E1	156 aa	Known RBP	10.48	□□□□□ -0.73
CSK-204	ENST00000563010	OSTC	Q9NRP0	149 aa		10.48	□□□□□ -0.73
CSK-204	ENST00000563010	TRBV7-9	A0A0J9YWB2	115 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010		J3KRW8	73 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	HLA-DRB4	P13762	266 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	FAM231D	Q6ZW35	169 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	APRG1	Q8IVJ8	170 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	STH	Q8IWL8	128 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	SMCO4	Q9NRQ5	59 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	HLA-DRB4	X5D2U9	266 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	STAB2	Q8WWQ8	2551 aa		10.47	□□□□□ -0.73
CSK-204	ENST00000563010	GPX1	P07203	203 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	TSPO	P30536	169 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	DEFB121	Q5J5C9	76 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	COX8C	Q7Z4L0	72 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	NUDT10	Q8NFP7	164 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	NUDT11	Q96G61	164 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	ODF3	Q96PU9	254 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	FAM110A	Q9BQ89	295 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	TMEM242	Q9NWH2	141 aa		10.46	□□□□□ -0.73
CSK-204	ENST00000563010	SH2D1A	O60880	128 aa		10.45	□□□□□ -0.74
CSK-204	ENST00000563010	CD7	P09564	240 aa		10.45	□□□□□ -0.74
CSK-204	ENST00000563010	S100P	P25815	95 aa		10.45	□□□□□ -0.74
CSK-204	ENST00000563010	ZNF124	Q15973	351 aa		10.45	□□□□□ -0.74
CSK-204	ENST00000563010	TMEM88	Q6PEY1	159 aa		10.45	□□□□□ -0.74
CSK-204	ENST00000563010	KCNIP4	Q6PIL6	250 aa		10.45	□□□□□ -0.74
CSK-204	ENST00000563010	RPP21	Q9H633	154 aa	Known RBP	10.45	□□□□□ -0.74
CSK-204	ENST00000563010	C19orf71	A6NCJ1	209 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010	CXorf65	A6NEN9	183 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010	FABP5P3	A8MUU1	101 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010		H3BMM0	161 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010	CRISP2	P16562	243 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010	BTN1A1	Q13410	526 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.44	□□□□□ -0.74
CSK-204	ENST00000563010	CBLN2	Q8IUK8	224 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010	FAM19A4	Q96LR4	140 aa		10.44	□□□□□ -0.74
CSK-204	ENST00000563010	TRAV21	A0A0B4J279	112 aa		10.43	□□□□□ -0.74
CSK-204	ENST00000563010	PFN1	P07737	140 aa	Known RBP	10.43	□□□□□ -0.74
CSK-204	ENST00000563010	RNASE4	P34096	147 aa	Known RBP	10.43	□□□□□ -0.74
CSK-204	ENST00000563010	CDKN1B	P46527	198 aa		10.43	□□□□□ -0.74
CSK-204	ENST00000563010	ZFAND2A	Q8N6M9	145 aa		10.43	□□□□□ -0.74
CSK-204	ENST00000563010	OR2D3	Q8NGH3	330 aa		10.43	□□□□□ -0.74
CSK-204	ENST00000563010		V9GYV3	84 aa		10.43	□□□□□ -0.74
CSK-204	ENST00000563010	XKRY2	A2RUG3	117 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010	TMEM189	A5PLL7	270 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010	ORM1	P02763	201 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010	CRIP1	P50238	77 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010	ZNF80	P51504	273 aa	Predicted RBP	10.42	□□□□□ -0.74
CSK-204	ENST00000563010	NUTF2	P61970	127 aa	Known RBP	10.42	□□□□□ -0.74
CSK-204	ENST00000563010	SPINK13	Q1W4C9	94 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010	CT83	Q5H943	113 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010	IL36B	Q9NZH7	164 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010	URGCP-MRPS24	S4R325	110 aa		10.42	□□□□□ -0.74
CSK-204	ENST00000563010		A8MWL6	223 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010	KLLN	B2CW77	178 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010		M0R2Z0	102 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010	FXYD7	P58549	80 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010	RPS20	P60866	119 aa	Known RBP	10.41	□□□□□ -0.74
CSK-204	ENST00000563010	PRR9	Q5T870	116 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010	IMMP2L	Q96T52	175 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010	TUBA4B	Q9H853	241 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010	NAGK	Q9UJ70	344 aa		10.41	□□□□□ -0.74
CSK-204	ENST00000563010	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.41	□□□□□ -0.74
CSK-204	ENST00000563010	TMSB15B	A0A087X1C1	80 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	C7orf71	A4D174	169 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010		A8MTW9	85 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	CA1	P00915	261 aa	Predicted RBP	10.4	□□□□□ -0.74
CSK-204	ENST00000563010	AMBP	P02760	352 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010		Q6AWC8	147 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	AMTN	Q6UX39	209 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	TRPT1	Q86TN4	253 aa	Known RBP	10.4	□□□□□ -0.74
CSK-204	ENST00000563010	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.4	□□□□□ -0.74
CSK-204	ENST00000563010	TSKU	Q8WUA8	353 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	WWC2-AS2	Q96NR7	200 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	CLUHP3	Q96NS8	147 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	WFDC10A	Q9H1F0	79 aa		10.4	□□□□□ -0.74
CSK-204	ENST00000563010	TRAV12-2	A0A075B6T6	113 aa		10.39	□□□□□ -0.75
CSK-204	ENST00000563010	TRAV12-3	A0A0B4J271	114 aa		10.39	□□□□□ -0.75
CSK-204	ENST00000563010	TCL1A	P56279	114 aa		10.39	□□□□□ -0.75
CSK-204	ENST00000563010	RPL19	P84098	196 aa	Known RBP	10.39	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms