RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 DNAH10Q8IVF4 4471 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 TRAV12-3A0A0B4J271 114 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 NUPR2A6NF83 97 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 ZNF253O75346 499 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 HBE1P02100 147 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 RNASE4P34096 147 aaKnown RBP4.14□□□□□ -1.75
CDH13-206ENST00000562601 CDKN1BP46527 198 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 TAS2R45P59539 299 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 PDE6HQ13956 83 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 ZNF266Q14584 549 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 RRN3P1Q2M238 152 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 KHDC3LQ587J8 217 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 GFI1BQ5VTD9 330 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 DGAT2L7PQ6IED9 249 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 Q6ZQT7 251 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 SSX7Q7RTT5 188 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 OR2G3Q8NGZ4 309 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 Q9H3A6 140 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 AAMDCQ9H7C9 122 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 CYTL1Q9NRR1 136 aa4.14□□□□□ -1.75
CDH13-206ENST00000562601 BORCS7-ASMTA0A0B4J1R7 106 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 LCE6AA0A183 80 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 PGPA6NDG6 321 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 SMIM9A6NGZ8 99 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 IGLL5B9A064 214 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 AMBPP02760 352 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 SPART-AS1P0CW21 52 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 ARL14EPLP0DKL9 152 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 HTN3P15516 51 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 TSPOP30536 169 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 LEPP41159 167 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 CDC34P49427 236 aaPredicted RBP4.13□□□□□ -1.75
CDH13-206ENST00000562601 GNG5P63218 68 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 CD300CQ08708 224 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 BTN1A1Q13410 526 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 PRR9Q5T870 116 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 FAM222AQ5U5X8 452 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 IQCF2Q8IXL9 164 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 Q8TAT8 98 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 MRPL53Q96EL3 112 aaKnown RBP4.13□□□□□ -1.75
CDH13-206ENST00000562601 PSMG3Q9BT73 122 aaPredicted RBP4.13□□□□□ -1.75
CDH13-206ENST00000562601 PRELID1Q9Y255 219 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 KLK5Q9Y337 293 aaPredicted RBP4.13□□□□□ -1.75
CDH13-206ENST00000562601 YTHDF2Q9Y5A9 579 aaKnown RBP4.13□□□□□ -1.75
CDH13-206ENST00000562601 DNAH6Q9C0G6 4158 aa4.13□□□□□ -1.75
CDH13-206ENST00000562601 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
CDH13-206ENST00000562601 DEFB131BA0A096LNP1 70 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 TRAV10A0A0B4J240 114 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 TMEM189A5PLL7 270 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 LY6G6CO95867 125 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 MBP02144 154 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 GPX1P07203 203 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 STAG3L2P0CL84 134 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 STAG3L3P0CL85 134 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 DEFB130BP0DP73 79 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 DEFB130AP0DP74 79 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 GCHFRP30047 84 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 CSN1S1P47710 185 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 FGF8P55075 233 aaPredicted RBP4.12□□□□□ -1.75
CDH13-206ENST00000562601 SERF2P84101 59 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 ZNF726P1Q15940 193 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 TMEM78Q5T7P6 136 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 C9orf47Q6ZRZ4 202 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 KCNRGQ8N5I3 272 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 C2CD4CQ8TF44 421 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 GNPNAT1Q96EK6 184 aaPredicted RBP4.12□□□□□ -1.75
CDH13-206ENST00000562601 ST6GAL2Q96JF0 529 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 SGK494Q96LW2 274 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 LINC00477Q96M19 166 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 NIPSNAP3BQ9BS92 247 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 ACTR3CQ9C0K3 210 aaPredicted RBP4.12□□□□□ -1.75
CDH13-206ENST00000562601 OTORQ9NRC9 128 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 ZNF492Q9P255 531 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 KMT2AQ03164 3969 aa4.12□□□□□ -1.75
CDH13-206ENST00000562601 DNAH2Q9P225 4427 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 TRAV8-1A0A0A6YYK1 113 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 PLAC8L1A1L4L8 177 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 C7orf71A4D174 169 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 HMSDA8MTL9 139 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 C11orf94C9JXX5 98 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 H7BYZ3 331 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 TAAR5O14804 337 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 SLC25A5P05141 298 aaKnown RBP4.11□□□□□ -1.75
CDH13-206ENST00000562601 FHITP49789 147 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 ZNF138P52744 262 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 TAS2R60P59551 318 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 UBE2G2P60604 165 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 DAD1P61803 113 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 AKR1C8PQ5T2L2 129 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 PQLC2Q6ZP29 291 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 GOLT1AQ6ZVE7 132 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 TMUB2Q71RG4 321 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 LYPD1Q8N2G4 141 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 TMEM256Q8N2U0 113 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 CMTM2Q8TAZ6 248 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 FAM19A4Q96LR4 140 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 ODF3Q96PU9 254 aa4.11□□□□□ -1.75
CDH13-206ENST00000562601 ZNF471Q9BX82 626 aaPredicted RBP4.11□□□□□ -1.75
CDH13-206ENST00000562601 NOP10Q9NPE3 64 aaKnown RBP4.11□□□□□ -1.75
CDH13-206ENST00000562601 TP53TG3Q9ULZ0 132 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms