RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 RBMY1A1P0DJD3 496 aaKnown RBP11.8□□□□□ -0.52
USB1-206ENST00000562534 RBMY1CP0DJD4 496 aa11.8□□□□□ -0.52
USB1-206ENST00000562534 RBMY1FQ15415 496 aaKnown RBP11.8□□□□□ -0.52
USB1-206ENST00000562534 PRNTQ86SH4 94 aa11.8□□□□□ -0.52
USB1-206ENST00000562534 FMC1Q96HJ9 113 aa11.8□□□□□ -0.52
USB1-206ENST00000562534 VAX2Q9UIW0 290 aa11.8□□□□□ -0.52
USB1-206ENST00000562534 ZFP30Q9Y2G7 519 aa11.8□□□□□ -0.52
USB1-206ENST00000562534 TRAV34A0A0B4J273 112 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 ZNF705GA8MUZ8 300 aaPredicted RBP11.79□□□□□ -0.52
USB1-206ENST00000562534 DEFB4AO15263 64 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 HTN1P15515 57 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 UBE2G1P62253 170 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 BTN1A1Q13410 526 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 LINC00467Q9BRT7 94 aa11.79□□□□□ -0.52
USB1-206ENST00000562534 TRBV6-1A0A0K0K1D8 114 aa11.78□□□□□ -0.52
USB1-206ENST00000562534 LOC102723971A0A1B0GUV8 181 aa11.78□□□□□ -0.52
USB1-206ENST00000562534 PDE6DO43924 150 aa11.78□□□□□ -0.52
USB1-206ENST00000562534 MEF2BQ02080 365 aaPredicted RBP11.78□□□□□ -0.52
USB1-206ENST00000562534 TMEM183BQ1AE95 376 aa11.78□□□□□ -0.52
USB1-206ENST00000562534 Q6AWC8 147 aa11.78□□□□□ -0.52
USB1-206ENST00000562534 HUWE1Q7Z6Z7 4374 aaKnown RBP11.77□□□□□ -0.53
USB1-206ENST00000562534 TRAV21A0A0B4J279 112 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 RGS13O14921 159 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 BCL2P10415 239 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 AZU1P20160 251 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 AKR1C3P42330 323 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 PRR9Q5T870 116 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 C11orf45Q8TAV5 145 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 C16orf74Q96GX8 76 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 TENM3Q9P273 2699 aa11.77□□□□□ -0.53
USB1-206ENST00000562534 CXorf65A6NEN9 183 aa11.76□□□□□ -0.53
USB1-206ENST00000562534 RBFOX3A6NFN3 312 aa11.76□□□□□ -0.53
USB1-206ENST00000562534 PRM2P04554 102 aa11.76□□□□□ -0.53
USB1-206ENST00000562534 SPART-AS1P0CW21 52 aa11.76□□□□□ -0.53
USB1-206ENST00000562534 EIF4E3Q8N5X7 224 aaKnown RBP11.76□□□□□ -0.53
USB1-206ENST00000562534 C2CD4CQ8TF44 421 aa11.76□□□□□ -0.53
USB1-206ENST00000562534 IGHV1OR15-1A0A075B7D0 117 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 TEX48A0A1B0GUV7 120 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 SCO2A0A1W2PP80 73 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 EMP1P54849 157 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 FAM159AQ6UWV7 190 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 MUC7Q8TAX7 377 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 TMEM263Q8WUH6 116 aaKnown RBP11.75□□□□□ -0.53
USB1-206ENST00000562534 C8orf49Q96NF6 230 aa11.75□□□□□ -0.53
USB1-206ENST00000562534 CBY3A6NI87 242 aa11.74□□□□□ -0.53
USB1-206ENST00000562534 FABP5P3A8MUU1 101 aa11.74□□□□□ -0.53
USB1-206ENST00000562534 GCGP01275 180 aa11.74□□□□□ -0.53
USB1-206ENST00000562534 LTAP01374 205 aa11.74□□□□□ -0.53
USB1-206ENST00000562534 COX8CQ7Z4L0 72 aa11.74□□□□□ -0.53
USB1-206ENST00000562534 Q86TA4 180 aa11.74□□□□□ -0.53
USB1-206ENST00000562534 C11orf52Q96A22 123 aa11.74□□□□□ -0.53
USB1-206ENST00000562534 TIMM8BQ9Y5J9 83 aaPredicted RBP11.74□□□□□ -0.53
USB1-206ENST00000562534 C3orf84H3BNL1 204 aa11.73□□□□□ -0.53
USB1-206ENST00000562534 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
USB1-206ENST00000562534 Q6ZQT7 251 aa11.73□□□□□ -0.53
USB1-206ENST00000562534 TMEM183AQ8IXX5 376 aa11.73□□□□□ -0.53
USB1-206ENST00000562534 RNASE8Q8TDE3 154 aaKnown RBP11.73□□□□□ -0.53
USB1-206ENST00000562534 KCNS1Q96KK3 526 aa11.73□□□□□ -0.53
USB1-206ENST00000562534 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
USB1-206ENST00000562534 DKK2Q9UBU2 259 aa11.73□□□□□ -0.53
USB1-206ENST00000562534 LYRM9A8MSI8 78 aa11.72□□□□□ -0.53
USB1-206ENST00000562534 NDUFS6O75380 124 aaKnown RBP11.72□□□□□ -0.53
USB1-206ENST00000562534 RPL35P42766 123 aaKnown RBP11.72□□□□□ -0.53
USB1-206ENST00000562534 RAB14P61106 215 aa11.72□□□□□ -0.53
USB1-206ENST00000562534 TDRG1Q3Y452 100 aa11.72□□□□□ -0.53
USB1-206ENST00000562534 ZNF506Q5JVG8 444 aa11.72□□□□□ -0.53
USB1-206ENST00000562534 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
USB1-206ENST00000562534 EIF5A2Q9GZV4 153 aaKnown RBP11.72□□□□□ -0.53
USB1-206ENST00000562534 STAB2Q8WWQ8 2551 aa11.72□□□□□ -0.53
USB1-206ENST00000562534 PLAC8L1A1L4L8 177 aa11.71□□□□□ -0.53
USB1-206ENST00000562534 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
USB1-206ENST00000562534 ZNF80P51504 273 aaPredicted RBP11.71□□□□□ -0.53
USB1-206ENST00000562534 MUC21Q5SSG8 566 aa11.71□□□□□ -0.53
USB1-206ENST00000562534 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
USB1-206ENST00000562534 FAM222AQ5U5X8 452 aa11.71□□□□□ -0.53
USB1-206ENST00000562534 FAM210AQ96ND0 272 aa11.71□□□□□ -0.53
USB1-206ENST00000562534 TMEM250H0YL14 139 aa11.7□□□□□ -0.54
USB1-206ENST00000562534 NANOS2P60321 138 aaKnown RBP11.7□□□□□ -0.54
USB1-206ENST00000562534 DAZ2Q13117 558 aaKnown RBP11.7□□□□□ -0.54
USB1-206ENST00000562534 ZNF767PQ75MW2 155 aa11.7□□□□□ -0.54
USB1-206ENST00000562534 MLST8Q9BVC4 326 aa11.7□□□□□ -0.54
USB1-206ENST00000562534 TRGV11A0A075B6L2 103 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 FAM162BQ5T6X4 162 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 PCNPQ8WW12 178 aaKnown RBP11.69□□□□□ -0.54
USB1-206ENST00000562534 ZC2HC1AQ96GY0 325 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 SDF2L1Q9HCN8 221 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 NOP10Q9NPE3 64 aaKnown RBP11.69□□□□□ -0.54
USB1-206ENST00000562534 GSN-AS1Q9NRJ2 163 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 TP53TG3Q9ULZ0 132 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 CELA1Q9UNI1 258 aa11.69□□□□□ -0.54
USB1-206ENST00000562534 CRIP1P50238 77 aa11.68□□□□□ -0.54
USB1-206ENST00000562534 ZNF674Q2M3X9 581 aa11.68□□□□□ -0.54
USB1-206ENST00000562534 TOR2AQ5JU69 321 aa11.68□□□□□ -0.54
USB1-206ENST00000562534 C11orf72Q8NBR9 251 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms