RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 CCL18P55774 89 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 EIF5AP63241 154 aaKnown RBP5.77□□□□□ -1.49
GINS3-204ENST00000561952 ICAM4Q14773 271 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 GUK1Q16774 197 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 ATP6V1FQ16864 119 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 SOHLH1Q5JUK2 328 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 ALKAL2Q6UX46 152 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 ZNF493Q6ZR52 646 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 MIR17HGQ75NE6 70 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 ZNF575Q86XF7 245 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 GNPNAT1Q96EK6 184 aaPredicted RBP5.77□□□□□ -1.49
GINS3-204ENST00000561952 C20orf144Q9BQM9 153 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 ZNF471Q9BX82 626 aaPredicted RBP5.77□□□□□ -1.49
GINS3-204ENST00000561952 TMPRSS5Q9H3S3 457 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 LINC00588Q9Y4M8 146 aa5.77□□□□□ -1.49
GINS3-204ENST00000561952 C7orf71A4D174 169 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 NDUFB4O95168 129 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 HIST1H1EP10412 219 aaKnown RBP5.76□□□□□ -1.49
GINS3-204ENST00000561952 HOXA5P20719 270 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 RNASE4P34096 147 aaKnown RBP5.76□□□□□ -1.49
GINS3-204ENST00000561952 Q6ZTI0 123 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 SSX7Q7RTT5 188 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 EIF4E3Q8N5X7 224 aaKnown RBP5.76□□□□□ -1.49
GINS3-204ENST00000561952 Q8TAT8 98 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 SMIM3Q9BZL3 60 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 SLC25A31Q9H0C2 315 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 MRPL18Q9H0U6 180 aaKnown RBP5.76□□□□□ -1.49
GINS3-204ENST00000561952 AAMDCQ9H7C9 122 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 GSN-AS1Q9NRJ2 163 aa5.76□□□□□ -1.49
GINS3-204ENST00000561952 MUC4Q99102 2169 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 TRGV2A0A075B6R0 118 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 TRGV1A0A0A0MS02 117 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 NBDYA0A0U1RRE5 68 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 OR7C2O60412 319 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 ZNF253O75346 499 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 MPDU1O75352 247 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 IGHV3-53P01767 116 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 SLC25A5P05141 298 aaKnown RBP5.75□□□□□ -1.49
GINS3-204ENST00000561952 GPX1P07203 203 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 M6PRP20645 277 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 TMEM78Q5T7P6 136 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 PRR9Q5T870 116 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 Q6ZQT7 251 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 ZNRF2Q8NHG8 242 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 MRPL53Q96EL3 112 aaKnown RBP5.75□□□□□ -1.49
GINS3-204ENST00000561952 ODF3Q96PU9 254 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 VGLL1Q99990 258 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 PYGO2Q9BRQ0 406 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 PAXXQ9BUH6 204 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 WDR61Q9GZS3 305 aaKnown RBP5.75□□□□□ -1.49
GINS3-204ENST00000561952 AGPAT4-IT1Q9H0P7 198 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 OR51M1Q9H341 326 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 TMEM14CQ9P0S9 112 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 RPH3ALQ9UNE2 315 aa5.75□□□□□ -1.49
GINS3-204ENST00000561952 NBEAP1P0C6P0 100 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 PDE6HQ13956 83 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 FFAR4Q5NUL3 377 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 EIF5AL1Q6IS14 154 aaKnown RBP5.74□□□□□ -1.49
GINS3-204ENST00000561952 C6orf223Q8N319 242 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 FAM167A-AS1Q96KT0 104 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 MRPL16Q9NX20 251 aaKnown RBP5.74□□□□□ -1.49
GINS3-204ENST00000561952 TP53TG3Q9ULZ0 132 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 PRELID1Q9Y255 219 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 KLF12Q9Y4X4 402 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 HSPG2P98160 4391 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 LRP1BQ9NZR2 4599 aa5.74□□□□□ -1.49
GINS3-204ENST00000561952 A0A096LPF7 62 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 KLLNB2CW77 178 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 C17orf112F2Z3M2 114 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 FAM3BP58499 235 aaPredicted RBP5.73□□□□□ -1.49
GINS3-204ENST00000561952 RANP62826 216 aaKnown RBP5.73□□□□□ -1.49
GINS3-204ENST00000561952 UBE2L3P68036 154 aaKnown RBP5.73□□□□□ -1.49
GINS3-204ENST00000561952 MUC21Q5SSG8 566 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 RPL7L1Q6DKI1 246 aaKnown RBP5.73□□□□□ -1.49
GINS3-204ENST00000561952 COMMD7Q86VX2 200 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 LINC00612Q8N6U2 182 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 C11orf72Q8NBR9 251 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 RXFP4Q8TDU9 374 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 FXYD5Q96DB9 178 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 LINC00477Q96M19 166 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 ATP5SQ99766 215 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 MRPL32Q9BYC8 188 aaKnown RBP5.73□□□□□ -1.49
GINS3-204ENST00000561952 Q9H8V8 135 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 KCNIP2Q9NS61 270 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 FUT9Q9Y231 359 aa5.73□□□□□ -1.49
GINS3-204ENST00000561952 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 IGHV1OR15-1A0A075B7D0 117 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 BORCS7-ASMTA0A0B4J1R7 106 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 C16orf90A8MZG2 172 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 ZNF324O75467 553 aaPredicted RBP5.72□□□□□ -1.49
GINS3-204ENST00000561952 IFNA5P01569 189 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 SEC11BP0C7V7 166 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 CSN1S1P47710 185 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 SULT1A2P50226 295 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 DAZ2Q13117 558 aaKnown RBP5.72□□□□□ -1.49
GINS3-204ENST00000561952 ESRGQ1W209 222 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 C9orf47Q6ZRZ4 202 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 ZFAND2AQ8N6M9 145 aa5.72□□□□□ -1.49
GINS3-204ENST00000561952 SCGB1C1Q8TD33 95 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms