RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 Q6ZTI0 123 aa16.69■□□□□ 0.26
CDR2-202ENST00000561630 GNPNAT1Q96EK6 184 aaPredicted RBP16.69■□□□□ 0.26
CDR2-202ENST00000561630 IBA57Q5T440 356 aaKnown RBP16.68■□□□□ 0.26
CDR2-202ENST00000561630 SUN5Q8TC36 379 aa16.68■□□□□ 0.26
CDR2-202ENST00000561630 BORCS7-ASMTA0A0B4J1R7 106 aa16.67■□□□□ 0.26
CDR2-202ENST00000561630 NUDT3O95989 172 aa16.67■□□□□ 0.26
CDR2-202ENST00000561630 TCL1AP56279 114 aa16.67■□□□□ 0.26
CDR2-202ENST00000561630 OR5I1Q13606 314 aa16.67■□□□□ 0.26
CDR2-202ENST00000561630 C18orf15Q96N68 181 aa16.67■□□□□ 0.26
CDR2-202ENST00000561630 TP53TG3Q9ULZ0 132 aa16.67■□□□□ 0.26
CDR2-202ENST00000561630 KLF12Q9Y4X4 402 aa16.67■□□□□ 0.26
CDR2-202ENST00000561630 HOXA5P20719 270 aa16.66■□□□□ 0.26
CDR2-202ENST00000561630 GCHFRP30047 84 aa16.66■□□□□ 0.26
CDR2-202ENST00000561630 FAM3BP58499 235 aaPredicted RBP16.66■□□□□ 0.26
CDR2-202ENST00000561630 LGALS9BQ3B8N2 356 aa16.66■□□□□ 0.26
CDR2-202ENST00000561630 Q6AWC8 147 aa16.66■□□□□ 0.26
CDR2-202ENST00000561630 GOLT1AQ6ZVE7 132 aa16.66■□□□□ 0.26
CDR2-202ENST00000561630 ST6GAL2Q96JF0 529 aa16.66■□□□□ 0.26
CDR2-202ENST00000561630 RPH3ALQ9UNE2 315 aa16.66■□□□□ 0.26
CDR2-202ENST00000561630 FAT2Q9NYQ8 4349 aa16.65■□□□□ 0.26
CDR2-202ENST00000561630 SPINK4O60575 86 aa16.65■□□□□ 0.26
CDR2-202ENST00000561630 ATG101Q9BSB4 218 aa16.65■□□□□ 0.26
CDR2-202ENST00000561630 ACTR3CQ9C0K3 210 aaPredicted RBP16.65■□□□□ 0.26
CDR2-202ENST00000561630 TMPRSS5Q9H3S3 457 aa16.65■□□□□ 0.26
CDR2-202ENST00000561630 DNAH17Q9UFH2 4485 aa16.64■□□□□ 0.25
CDR2-202ENST00000561630 TRAV26-1A0A087WT03 109 aa16.64■□□□□ 0.25
CDR2-202ENST00000561630 TRGV1A0A0A0MS02 117 aa16.64■□□□□ 0.25
CDR2-202ENST00000561630 M0R2N4 97 aa16.64■□□□□ 0.25
CDR2-202ENST00000561630 ARPC5LQ9BPX5 153 aa16.64■□□□□ 0.25
CDR2-202ENST00000561630 IGLV2-18A0A075B6J9 118 aa16.63■□□□□ 0.25
CDR2-202ENST00000561630 TRGV2A0A075B6R0 118 aa16.63■□□□□ 0.25
CDR2-202ENST00000561630 CXorf1O96002 111 aa16.63■□□□□ 0.25
CDR2-202ENST00000561630 GNG5P63218 68 aa16.63■□□□□ 0.25
CDR2-202ENST00000561630 TMEM167BQ9NRX6 74 aa16.63■□□□□ 0.25
CDR2-202ENST00000561630 TRAV8-1A0A0A6YYK1 113 aa16.62■□□□□ 0.25
CDR2-202ENST00000561630 TAAR5O14804 337 aa16.62■□□□□ 0.25
CDR2-202ENST00000561630 ARPC5O15511 151 aa16.62■□□□□ 0.25
CDR2-202ENST00000561630 MUC21Q5SSG8 566 aa16.62■□□□□ 0.25
CDR2-202ENST00000561630 Q6ZR54 194 aa16.62■□□□□ 0.25
CDR2-202ENST00000561630 SSX7Q7RTT5 188 aa16.62■□□□□ 0.25
CDR2-202ENST00000561630 C5orf17Q8NAS9 161 aa16.62■□□□□ 0.25
CDR2-202ENST00000561630 SERTM2A0A1B0GWG4 89 aa16.61■□□□□ 0.25
CDR2-202ENST00000561630 H3BNG1 76 aa16.61■□□□□ 0.25
CDR2-202ENST00000561630 A0A0J9YY99 117 aa16.6■□□□□ 0.25
CDR2-202ENST00000561630 CCL18P55774 89 aa16.6■□□□□ 0.25
CDR2-202ENST00000561630 ZNF415Q09FC8 603 aa16.6■□□□□ 0.25
CDR2-202ENST00000561630 LINC00336Q6ZUF6 198 aa16.6■□□□□ 0.25
CDR2-202ENST00000561630 TVP23CQ96ET8 276 aa16.6■□□□□ 0.25
CDR2-202ENST00000561630 CYTL1Q9NRR1 136 aa16.6■□□□□ 0.25
CDR2-202ENST00000561630 SMLR1H3BR10 107 aa16.59■□□□□ 0.25
CDR2-202ENST00000561630 TCRAP04437 139 aa16.59■□□□□ 0.25
CDR2-202ENST00000561630 ZNF726P1Q15940 193 aa16.59■□□□□ 0.25
CDR2-202ENST00000561630 TDRG1Q3Y452 100 aa16.59■□□□□ 0.25
CDR2-202ENST00000561630 FAM159AQ6UWV7 190 aa16.59■□□□□ 0.25
CDR2-202ENST00000561630 TREM1Q9NP99 234 aa16.59■□□□□ 0.25
CDR2-202ENST00000561630 MDFICQ9P1T7 246 aa16.59■□□□□ 0.25
CDR2-202ENST00000561630 GGTLC3B5MD39 225 aa16.58■□□□□ 0.24
CDR2-202ENST00000561630 SUMO1P63165 101 aaKnown RBP16.58■□□□□ 0.24
CDR2-202ENST00000561630 ZNRF2Q8NHG8 242 aa16.58■□□□□ 0.24
CDR2-202ENST00000561630 MRPL16Q9NX20 251 aaKnown RBP16.58■□□□□ 0.24
CDR2-202ENST00000561630 LINC00588Q9Y4M8 146 aa16.58■□□□□ 0.24
CDR2-202ENST00000561630 TRAV21A0A0B4J279 112 aa16.57■□□□□ 0.24
CDR2-202ENST00000561630 CTXND1A0A1B0GTU2 59 aa16.57■□□□□ 0.24
CDR2-202ENST00000561630 RTL8CO15255 209 aa16.57■□□□□ 0.24
CDR2-202ENST00000561630 TMEM183BQ1AE95 376 aa16.57■□□□□ 0.24
CDR2-202ENST00000561630 TMEM183AQ8IXX5 376 aa16.57■□□□□ 0.24
CDR2-202ENST00000561630 TRGV11A0A075B6L2 103 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 F6UZH7 168 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 K7EQM0 130 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 AKR1C8PQ5T2L2 129 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 IQCF2Q8IXL9 164 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 VSIG2Q96IQ7 327 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 SGK494Q96LW2 274 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 EPDR1Q9UM22 224 aa16.56■□□□□ 0.24
CDR2-202ENST00000561630 A0A1W2PRE2 83 aa16.55■□□□□ 0.24
CDR2-202ENST00000561630 SPXQ9BT56 116 aa16.55■□□□□ 0.24
CDR2-202ENST00000561630 NDFIP1Q9BT67 221 aa16.55■□□□□ 0.24
CDR2-202ENST00000561630 NAGKQ9UJ70 344 aa16.55■□□□□ 0.24
CDR2-202ENST00000561630 NACAE9PAV3 2078 aa16.54■□□□□ 0.24
CDR2-202ENST00000561630 IGLV2-11P01706 119 aa16.54■□□□□ 0.24
CDR2-202ENST00000561630 ZNF345Q14585 488 aa16.54■□□□□ 0.24
CDR2-202ENST00000561630 KCNRGQ8N5I3 272 aa16.54■□□□□ 0.24
CDR2-202ENST00000561630 CYB561D1Q8N8Q1 229 aa16.54■□□□□ 0.24
CDR2-202ENST00000561630 PSG8Q9UQ74 426 aa16.53■□□□□ 0.24
CDR2-202ENST00000561630 HMSDA8MTL9 139 aa16.52■□□□□ 0.24
CDR2-202ENST00000561630 GNRH2O43555 120 aa16.52■□□□□ 0.24
CDR2-202ENST00000561630 IGHV3-53P01767 116 aa16.52■□□□□ 0.24
CDR2-202ENST00000561630 FLI1Q01543 452 aaPredicted RBP16.52■□□□□ 0.24
CDR2-202ENST00000561630 OR11H4Q8NGC9 324 aa16.52■□□□□ 0.24
CDR2-202ENST00000561630 RASL10AQ92737 203 aa16.52■□□□□ 0.24
CDR2-202ENST00000561630 IGHV3-16A0A0C4DH30 117 aa16.51■□□□□ 0.23
CDR2-202ENST00000561630 FBLL1A6NHQ2 334 aaKnown RBP16.51■□□□□ 0.23
CDR2-202ENST00000561630 ESRGQ1W209 222 aa16.51■□□□□ 0.23
CDR2-202ENST00000561630 TMEM75Q8N9X5 138 aa16.51■□□□□ 0.23
CDR2-202ENST00000561630 KCNS1Q96KK3 526 aa16.51■□□□□ 0.23
CDR2-202ENST00000561630 C8orf49Q96NF6 230 aa16.51■□□□□ 0.23
CDR2-202ENST00000561630 MUC4Q99102 2169 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 A0A096LPF7 62 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 NBDYA0A0U1RRE5 68 aa16.5■□□□□ 0.23
CDR2-202ENST00000561630 PRSS29PA6NIE9 313 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms