RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 NOTCH2NLQ7Z3S9 236 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 Q8N7P7 452 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 OR51G1Q8NGK1 321 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 OR4X1Q8NH49 305 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 OCC1Q8TAD7 63 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 HIST1H2BAQ96A08 127 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 C11orf52Q96A22 123 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 ACY3Q96HD9 319 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 FAM210BQ96KR6 192 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 TXN2Q99757 166 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 PARLQ9H300 379 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 VSIRQ9H7M9 311 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 SLC25A22Q9H936 323 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 METTL1Q9UBP6 276 aaKnown RBP2.37□□□□□ -2.03
SPG11-225ENST00000561391 F11RQ9Y624 299 aaKnown RBP2.37□□□□□ -2.03
SPG11-225ENST00000561391 AGRNO00468 2067 aa2.37□□□□□ -2.03
SPG11-225ENST00000561391 DNAH6Q9C0G6 4158 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 TRBV9A0A0B4J1U6 114 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 IGLC7A0M8Q6 106 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 C5orf52A6NGY3 159 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ODF3BA8MYP8 253 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 K7EQM0 130 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ISLRO14498 428 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 NBR2O15453 112 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 OR7C2O60412 319 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 SAP30O75446 220 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 FCN3O75636 299 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 TYMSP04818 313 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 PFN1P07737 140 aaKnown RBP2.36□□□□□ -2.03
SPG11-225ENST00000561391 OR10J4P0C629 311 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 RD3LP0DJH9 198 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 RPL35AP18077 110 aaKnown RBP2.36□□□□□ -2.03
SPG11-225ENST00000561391 S100A2P29034 98 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ASIPP42127 132 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 RPS10P46783 165 aaKnown RBP2.36□□□□□ -2.03
SPG11-225ENST00000561391 GALR1P47211 349 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 GNG4P50150 75 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 MEOX2P50222 304 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 INSL3P51460 131 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 CNN1P51911 297 aaKnown RBP2.36□□□□□ -2.03
SPG11-225ENST00000561391 PLP1P60201 277 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 YPEL3P61236 119 aaPredicted RBP2.36□□□□□ -2.03
SPG11-225ENST00000561391 RPL23P62829 140 aaKnown RBP2.36□□□□□ -2.03
SPG11-225ENST00000561391 S100A12P80511 92 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 WT1-ASQ06250 92 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 KIAA0141Q14154 515 aaPredicted RBP2.36□□□□□ -2.03
SPG11-225ENST00000561391 EBI3Q14213 229 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ELOBQ15370 118 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 TNXAQ16473 311 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ZNF674Q2M3X9 581 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ADAMTSL4-AS1Q5T5F5 129 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 Q5VSD8 79 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 DYNAPQ8N1N2 210 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 LYPD1Q8N2G4 141 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ARL6IP6Q8N6S5 226 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 OR10W1Q8NGF6 305 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 OR10G8Q8NGN5 311 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 Q8WTZ3 238 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 SFRP2Q96HF1 295 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 YPEL4Q96NS1 127 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 ATP6V0BQ99437 205 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 PYGO2Q9BRQ0 406 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 PAXXQ9BUH6 204 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 OR51M1Q9H341 326 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 SRD5A3Q9H8P0 318 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 TMEM14CQ9P0S9 112 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 LINC00527Q9UJ94 153 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 PITPNC1Q9UKF7 332 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 LRP1BQ9NZR2 4599 aa2.36□□□□□ -2.03
SPG11-225ENST00000561391 A0A087X002 238 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 A0A0J9YWU9 116 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 TRBV6-1A0A0K0K1D8 114 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 SERTM2A0A1B0GWG4 89 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 M0QZK8 103 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 GGCTO75223 188 aaKnown RBP2.35□□□□□ -2.03
SPG11-225ENST00000561391 NDUFA3O95167 84 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 GCGP01275 180 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 MT-ND6P03923 174 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 NBEAP1P0C6P0 100 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 SMIM6P0DI80 62 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 HIST1H1EP10412 219 aaKnown RBP2.35□□□□□ -2.03
SPG11-225ENST00000561391 COX7A1P24310 79 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 FCGR2BP31994 310 aaPredicted RBP2.35□□□□□ -2.03
SPG11-225ENST00000561391 AKR1C3P42330 323 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 RPL35P42766 123 aaKnown RBP2.35□□□□□ -2.03
SPG11-225ENST00000561391 CDX1P47902 265 aaPredicted RBP2.35□□□□□ -2.03
SPG11-225ENST00000561391 AKR1D1P51857 326 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 XGP55808 180 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 UBE2L3P68036 154 aaKnown RBP2.35□□□□□ -2.03
SPG11-225ENST00000561391 HES1Q14469 280 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 FXYD3Q14802 87 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 MMDQ15546 238 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 C5orf64Q2M2E5 130 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 MRGPRG-AS1Q2M3A8 158 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 C14orf177Q52M58 125 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 SMUG1Q53HV7 270 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 GCSAMLQ5JQS6 135 aa2.35□□□□□ -2.03
SPG11-225ENST00000561391 DNLZQ5SXM8 178 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms