RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 K7EQM0 130 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 BCL2L11O43521 198 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 FHITP49789 147 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 ZNF726P1Q15940 193 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 TMEM263Q8WUH6 116 aaKnown RBP7.21□□□□□ -1.26
HERC1-212ENST00000561348 LINC00476Q8WZB0 136 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 PYGO2Q9BRQ0 406 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 MAP1LC3BQ9GZQ8 125 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 GSN-AS1Q9NRJ2 163 aa7.21□□□□□ -1.26
HERC1-212ENST00000561348 LYRM9A8MSI8 78 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 NKX2-5P52952 324 aaPredicted RBP7.2□□□□□ -1.26
HERC1-212ENST00000561348 EIF5AP63241 154 aaKnown RBP7.2□□□□□ -1.26
HERC1-212ENST00000561348 OR5I1Q13606 314 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 ZNF345Q14585 488 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 NDUFA5Q16718 116 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 CST9LP1Q5W188 147 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 ZNF493Q6ZR52 646 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 PRNTQ86SH4 94 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 UBE2DNLQ8IWF7 75 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 EIF4E3Q8N5X7 224 aaKnown RBP7.2□□□□□ -1.26
HERC1-212ENST00000561348 ZFAND2AQ8N6M9 145 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 STOML3Q8TAV4 291 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 RNASE8Q8TDE3 154 aaKnown RBP7.2□□□□□ -1.26
HERC1-212ENST00000561348 TMED6Q8WW62 240 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 NDFIP1Q9BT67 221 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 NDUFAF3Q9BU61 184 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 TREM1Q9NP99 234 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 TP53TG3Q9ULZ0 132 aa7.2□□□□□ -1.26
HERC1-212ENST00000561348 IGHV1OR15-1A0A075B7D0 117 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 TRGV1A0A0A0MS02 117 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 TRAV34A0A0B4J273 112 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 RBAKDNA6NC62 111 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 KLLNB2CW77 178 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 NUDT3O95989 172 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 C1QBP02746 253 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 TCRAP04437 139 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 TPT1P13693 172 aaKnown RBP7.19□□□□□ -1.26
HERC1-212ENST00000561348 CRISP2P16562 243 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 FAM159AQ6UWV7 190 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 C5orf17Q8NAS9 161 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 SFT2D1Q8WV19 159 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 APLNQ9ULZ1 77 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 EPDR1Q9UM22 224 aa7.19□□□□□ -1.26
HERC1-212ENST00000561348 KMT2CQ8NEZ4 4911 aaKnown RBP7.19□□□□□ -1.26
HERC1-212ENST00000561348 TRGV2A0A075B6R0 118 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 PLAC8L1A1L4L8 177 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 GGTLC3B5MD39 225 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 ZNF324O75467 553 aaPredicted RBP7.18□□□□□ -1.26
HERC1-212ENST00000561348 ATP5G1P05496 136 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 SEC11BP0C7V7 166 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 ATP5G3P48201 142 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 IFITM2Q01629 132 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 TNP2Q05952 138 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 TMEM183BQ1AE95 376 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 TMEM88Q6PEY1 159 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 Q6ZTI0 123 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 TMEM183AQ8IXX5 376 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 FAM19A4Q96LR4 140 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 C8orf49Q96NF6 230 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 KLF12Q9Y4X4 402 aa7.18□□□□□ -1.26
HERC1-212ENST00000561348 IGHV3-53P01767 116 aa7.17□□□□□ -1.26
HERC1-212ENST00000561348 NMBP08949 121 aa7.17□□□□□ -1.26
HERC1-212ENST00000561348 FLI1Q01543 452 aaPredicted RBP7.17□□□□□ -1.26
HERC1-212ENST00000561348 LGALSLQ3ZCW2 172 aaPredicted RBP7.17□□□□□ -1.26
HERC1-212ENST00000561348 LCE2AQ5TA79 106 aaPredicted RBP7.17□□□□□ -1.26
HERC1-212ENST00000561348 CYB561D1Q8N8Q1 229 aa7.17□□□□□ -1.26
HERC1-212ENST00000561348 ZNF680Q8NEM1 530 aa7.17□□□□□ -1.26
HERC1-212ENST00000561348 LINC00479Q96M42 142 aa7.17□□□□□ -1.26
HERC1-212ENST00000561348 MRPL16Q9NX20 251 aaKnown RBP7.17□□□□□ -1.26
HERC1-212ENST00000561348 PSG8Q9UQ74 426 aa7.17□□□□□ -1.26
HERC1-212ENST00000561348 A0A0J9YY99 117 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 A0A1W2PRE2 83 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 FAM74A7A6NL05 159 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 UMAD1C9J7I0 102 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 PAGE4O60829 102 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 GCGP01275 180 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 H2AFB1P0C5Y9 115 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 PPT1P50897 306 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 TCTAP57738 103 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 ZNF415Q09FC8 603 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 LGALS9CQ6DKI2 356 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 TVP23CQ96ET8 276 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 ATG101Q9BSB4 218 aa7.16□□□□□ -1.26
HERC1-212ENST00000561348 TRAV21A0A0B4J279 112 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 SERTM2A0A1B0GWG4 89 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 PEX7O00628 323 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 GNRH2O43555 120 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 UBE2G1P62253 170 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 ANXA2RQ3ZCQ2 193 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 LCE2CQ5TA81 110 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 EIF5AL1Q6IS14 154 aaKnown RBP7.15□□□□□ -1.26
HERC1-212ENST00000561348 SUN5Q8TC36 379 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 MDFICQ9P1T7 246 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 LENEPQ9Y5L5 61 aa7.15□□□□□ -1.26
HERC1-212ENST00000561348 TRGV11A0A075B6L2 103 aa7.14□□□□□ -1.27
HERC1-212ENST00000561348 TRAV26-1A0A087WT03 109 aa7.14□□□□□ -1.27
HERC1-212ENST00000561348 TRBV7-9A0A0J9YWB2 115 aa7.14□□□□□ -1.27
HERC1-212ENST00000561348 M0R2N4 97 aa7.14□□□□□ -1.27
HERC1-212ENST00000561348 P0DMU3 169 aa7.14□□□□□ -1.27
HERC1-212ENST00000561348 FAM231AP0DMU4 169 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms