RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TM2D2Q9BX73 214 aa12.32□□□□□ -0.44
TPM1-226ENST00000560959 SLC39A9Q9NUM3 307 aa12.32□□□□□ -0.44
TPM1-226ENST00000560959 PLA2G2DQ9UNK4 145 aa12.32□□□□□ -0.44
TPM1-226ENST00000560959 IGKV2-40A0A087WW87 121 aaPredicted RBP12.31□□□□□ -0.44
TPM1-226ENST00000560959 IGKV2D-40P01614 121 aaPredicted RBP12.31□□□□□ -0.44
TPM1-226ENST00000560959 MBPP02686 304 aaPredicted RBP12.31□□□□□ -0.44
TPM1-226ENST00000560959 ZNF138P52744 262 aa12.31□□□□□ -0.44
TPM1-226ENST00000560959 VWC2Q2TAL6 325 aa12.31□□□□□ -0.44
TPM1-226ENST00000560959 UQCC1Q9NVA1 299 aa12.31□□□□□ -0.44
TPM1-226ENST00000560959 GSKIPQ9P0R6 139 aa12.31□□□□□ -0.44
TPM1-226ENST00000560959 FAT3Q8TDW7 4589 aa12.3□□□□□ -0.44
TPM1-226ENST00000560959 TRAV8-6A0A0B4J262 113 aa12.3□□□□□ -0.44
TPM1-226ENST00000560959 NDUFB6O95139 128 aa12.3□□□□□ -0.44
TPM1-226ENST00000560959 ZNF266Q14584 549 aa12.3□□□□□ -0.44
TPM1-226ENST00000560959 LAGE3Q14657 143 aa12.3□□□□□ -0.44
TPM1-226ENST00000560959 V9GYH0 126 aa12.3□□□□□ -0.44
TPM1-226ENST00000560959 L7N2F9 121 aa12.29□□□□□ -0.44
TPM1-226ENST00000560959 PFN1P07737 140 aaKnown RBP12.29□□□□□ -0.44
TPM1-226ENST00000560959 VAMP2P63027 116 aa12.29□□□□□ -0.44
TPM1-226ENST00000560959 OR4C5Q8NGB2 326 aa12.29□□□□□ -0.44
TPM1-226ENST00000560959 Q9HAA7 133 aa12.29□□□□□ -0.44
TPM1-226ENST00000560959 TRGV11A0A075B6L2 103 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 NAP1L6A6NFF2 107 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 PYYP10082 97 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 PPT1P50897 306 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 KRTAP10-4P60372 401 aaPredicted RBP12.28□□□□□ -0.44
TPM1-226ENST00000560959 ASAH1Q13510 395 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 ZNF846Q147U1 533 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 Q6AWC8 147 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 FAM122CQ6P4D5 195 aa12.28□□□□□ -0.44
TPM1-226ENST00000560959 RBAKDNA6NC62 111 aa12.27□□□□□ -0.45
TPM1-226ENST00000560959 MUC21Q5SSG8 566 aa12.27□□□□□ -0.45
TPM1-226ENST00000560959 FAM159AQ6UWV7 190 aa12.27□□□□□ -0.45
TPM1-226ENST00000560959 NHLRC2Q8NBF2 726 aa12.27□□□□□ -0.45
TPM1-226ENST00000560959 MITD1Q8WV92 249 aa12.27□□□□□ -0.45
TPM1-226ENST00000560959 GPN1Q9HCN4 374 aaPredicted RBP12.27□□□□□ -0.45
TPM1-226ENST00000560959 FLVCR2Q9UPI3 526 aa12.27□□□□□ -0.45
TPM1-226ENST00000560959 LOC100131303A0A0U1RQF7 123 aa12.26□□□□□ -0.45
TPM1-226ENST00000560959 NBEAP1P0C6P0 100 aa12.26□□□□□ -0.45
TPM1-226ENST00000560959 GATA1P15976 413 aaPredicted RBP12.26□□□□□ -0.45
TPM1-226ENST00000560959 S100A11P31949 105 aa12.26□□□□□ -0.45
TPM1-226ENST00000560959 LENEPQ9Y5L5 61 aa12.26□□□□□ -0.45
TPM1-226ENST00000560959 M0R2P5 195 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 CST7O76096 145 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 BCAP31P51572 246 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 TMEM183BQ1AE95 376 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 OR10J3Q5JRS4 329 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 LELP1Q5T871 98 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 SCXQ7RTU7 201 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 TMEM183AQ8IXX5 376 aa12.25□□□□□ -0.45
TPM1-226ENST00000560959 CIDEAO60543 219 aa12.24□□□□□ -0.45
TPM1-226ENST00000560959 CAV2P51636 162 aa12.24□□□□□ -0.45
TPM1-226ENST00000560959 BAXQ07812 192 aa12.24□□□□□ -0.45
TPM1-226ENST00000560959 Q8TAT8 98 aa12.24□□□□□ -0.45
TPM1-226ENST00000560959 FAM167A-AS1Q96KT0 104 aa12.24□□□□□ -0.45
TPM1-226ENST00000560959 SLC25A2Q9BXI2 301 aa12.24□□□□□ -0.45
TPM1-226ENST00000560959 C11orf1Q9H5F2 150 aa12.24□□□□□ -0.45
TPM1-226ENST00000560959 H3BMQ9 156 aa12.23□□□□□ -0.45
TPM1-226ENST00000560959 CSN1S1P47710 185 aa12.23□□□□□ -0.45
TPM1-226ENST00000560959 SULT1A1P50225 295 aa12.23□□□□□ -0.45
TPM1-226ENST00000560959 WFDC2Q14508 124 aa12.23□□□□□ -0.45
TPM1-226ENST00000560959 BAK1Q16611 211 aa12.23□□□□□ -0.45
TPM1-226ENST00000560959 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
TPM1-226ENST00000560959 CHAC1Q9BUX1 264 aa12.23□□□□□ -0.45
TPM1-226ENST00000560959 TRAV8-3A0A0A6YYJ7 113 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 FAM24AA6NFZ4 105 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 NOL3O60936 208 aaKnown RBP12.22□□□□□ -0.45
TPM1-226ENST00000560959 IGHV3-30P01768 117 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 IGHV3-33P01772 117 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 IGHV3-30-5P0DP03 117 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 CNPY1Q3B7I2 92 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 PRADC1Q9BSG0 188 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 OR51M1Q9H341 326 aa12.22□□□□□ -0.45
TPM1-226ENST00000560959 UBE2L5PA0A1B0GUS4 154 aa12.21□□□□□ -0.45
TPM1-226ENST00000560959 PVALBP20472 110 aaPredicted RBP12.21□□□□□ -0.45
TPM1-226ENST00000560959 FGF7P21781 194 aa12.21□□□□□ -0.45
TPM1-226ENST00000560959 S100A5P33763 92 aa12.21□□□□□ -0.45
TPM1-226ENST00000560959 HBG1P69891 147 aa12.21□□□□□ -0.45
TPM1-226ENST00000560959 HBG2P69892 147 aa12.21□□□□□ -0.45
TPM1-226ENST00000560959 ACOT6Q3I5F7 207 aaPredicted RBP12.21□□□□□ -0.45
TPM1-226ENST00000560959 SH3BGRL3Q9H299 93 aa12.21□□□□□ -0.45
TPM1-226ENST00000560959 LSM5Q9Y4Y9 91 aaKnown RBP12.21□□□□□ -0.45
TPM1-226ENST00000560959 COX11Q9Y6N1 276 aa12.21□□□□□ -0.45
TPM1-226ENST00000560959 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
TPM1-226ENST00000560959 TRBV6-4A0A1B0GX49 114 aa12.2□□□□□ -0.46
TPM1-226ENST00000560959 SLC25A29Q8N8R3 303 aa12.2□□□□□ -0.46
TPM1-226ENST00000560959 TMED6Q8WW62 240 aa12.2□□□□□ -0.46
TPM1-226ENST00000560959 FXYD5Q96DB9 178 aa12.2□□□□□ -0.46
TPM1-226ENST00000560959 GTSF1LQ9H1H1 148 aa12.2□□□□□ -0.46
TPM1-226ENST00000560959 LYRM2Q9NU23 88 aaPredicted RBP12.2□□□□□ -0.46
TPM1-226ENST00000560959 FBLL1A6NHQ2 334 aaKnown RBP12.19□□□□□ -0.46
TPM1-226ENST00000560959 INPP1P49441 399 aa12.19□□□□□ -0.46
TPM1-226ENST00000560959 RHOHQ15669 191 aa12.19□□□□□ -0.46
TPM1-226ENST00000560959 GCSAMLQ5JQS6 135 aa12.19□□□□□ -0.46
TPM1-226ENST00000560959 TOR2AQ5JU69 321 aa12.19□□□□□ -0.46
TPM1-226ENST00000560959 TMEM252Q8N6L7 170 aa12.19□□□□□ -0.46
TPM1-226ENST00000560959 PAXXQ9BUH6 204 aa12.19□□□□□ -0.46
TPM1-226ENST00000560959 NPCDR1Q9BY65 106 aa12.19□□□□□ -0.46
TPM1-226ENST00000560959 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms