RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 PRSS33Q8NF86 280 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 FBXL15Q9H469 300 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 RAX2Q96IS3 184 aa12.37□□□□□ -0.43
PBX1-219ENST00000560641 IGKV3D-20A0A0C4DH25 116 aa12.36□□□□□ -0.43
PBX1-219ENST00000560641 TCL1BO95988 128 aa12.36□□□□□ -0.43
PBX1-219ENST00000560641 MFAP4P55083 255 aa12.36□□□□□ -0.43
PBX1-219ENST00000560641 LYPD2Q6UXB3 125 aa12.36□□□□□ -0.43
PBX1-219ENST00000560641 Q8TAT8 98 aa12.36□□□□□ -0.43
PBX1-219ENST00000560641 INTS1Q8N201 2190 aaKnown RBP12.36□□□□□ -0.43
PBX1-219ENST00000560641 NPBQ8NG41 125 aa12.36□□□□□ -0.43
PBX1-219ENST00000560641 PRADC1Q9BSG0 188 aa12.36□□□□□ -0.43
PBX1-219ENST00000560641 SS18L2Q9UHA2 77 aa12.35□□□□□ -0.43
PBX1-219ENST00000560641 TRAV17A0A0B4J275 112 aa12.35□□□□□ -0.43
PBX1-219ENST00000560641 TRGV3P03979 118 aa12.35□□□□□ -0.43
PBX1-219ENST00000560641 AJUBAQ96IF1 538 aa12.35□□□□□ -0.43
PBX1-219ENST00000560641 PLXNB1O43157 2135 aa12.35□□□□□ -0.43
PBX1-219ENST00000560641 TDHQ8IZJ6 230 aa12.35□□□□□ -0.43
PBX1-219ENST00000560641 CFHR4Q92496 578 aa12.35□□□□□ -0.43
PBX1-219ENST00000560641 MRPL53Q96EL3 112 aaKnown RBP12.35□□□□□ -0.43
PBX1-219ENST00000560641 RALYQ9UKM9 306 aaKnown RBP12.35□□□□□ -0.43
PBX1-219ENST00000560641 CCL8P80075 99 aa12.34□□□□□ -0.43
PBX1-219ENST00000560641 ANKRD29Q8N6D5 301 aa12.34□□□□□ -0.43
PBX1-219ENST00000560641 FANCD2OSQ96PS1 177 aa12.34□□□□□ -0.43
PBX1-219ENST00000560641 EFNA4P52798 201 aa12.34□□□□□ -0.43
PBX1-219ENST00000560641 HIF1ANQ9NWT6 349 aa12.34□□□□□ -0.43
PBX1-219ENST00000560641 ARFGEF3Q5TH69 2177 aa12.34□□□□□ -0.43
PBX1-219ENST00000560641 C10orf126Q8N4M7 172 aa12.33□□□□□ -0.43
PBX1-219ENST00000560641 BAALCQ8WXS3 180 aa12.33□□□□□ -0.43
PBX1-219ENST00000560641 A0A0J9YY99 117 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 ZNF815PA8K554 130 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 M0R381 172 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 KLK9Q2XQG4 91 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 DYNAPQ8N1N2 210 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 PTH2Q96A98 100 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 KLK9Q9UKQ9 250 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 NDUFV3P56181 108 aaKnown RBP12.33□□□□□ -0.44
PBX1-219ENST00000560641 ADIPOQQ15848 244 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 ATP1A1-AS1Q5TC04 95 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 RASL10AQ92737 203 aa12.33□□□□□ -0.44
PBX1-219ENST00000560641 SCGB3A1Q96QR1 104 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 FAM186AA6NE01 2351 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 IGHV3-30P01768 117 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 IGHV3-30-5P0DP03 117 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 PRR30Q53SZ7 412 aaPredicted RBP12.32□□□□□ -0.44
PBX1-219ENST00000560641 UFC1Q9Y3C8 167 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 P0DMU3 169 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 FAM231AP0DMU4 169 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 FAM231CP0DMU5 169 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 RPL32P62910 135 aaKnown RBP12.32□□□□□ -0.44
PBX1-219ENST00000560641 PLEKHB2Q96CS7 222 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 C11orf21Q9P2W6 132 aa12.32□□□□□ -0.44
PBX1-219ENST00000560641 LOC107984156A0A0G2JMH3 177 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
PBX1-219ENST00000560641 ARL17AQ8IVW1 177 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 PRUNE2Q8WUY3 3088 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 TRBV7-9A0A0J9YWB2 115 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 CFC1BP0CG36 223 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 CFC1P0CG37 223 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 HLA-DMBP28068 263 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 MRPL23Q16540 153 aaKnown RBP12.31□□□□□ -0.44
PBX1-219ENST00000560641 POM121L12Q8N7R1 296 aa12.31□□□□□ -0.44
PBX1-219ENST00000560641 IGHV1-69DA0A0B4J2H0 117 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 GAGE12JA6NER3 117 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 RNF223E7ERA6 249 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 GAGE7O76087 117 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 GAGE12FP0CL80 117 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 GAGE12GP0CL81 117 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 GAGE12IP0CL82 117 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 GAGE4Q13068 117 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 SLC25A29Q8N8R3 303 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 LINC01548A6NM66 108 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 FAM215AQ9Y5M1 114 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 MALRD1Q5VYJ5 2156 aa12.3□□□□□ -0.44
PBX1-219ENST00000560641 NBR2O15453 112 aa12.29□□□□□ -0.44
PBX1-219ENST00000560641 SUMO2P61956 95 aaKnown RBP12.29□□□□□ -0.44
PBX1-219ENST00000560641 C21orf62Q9NYP8 219 aa12.29□□□□□ -0.44
PBX1-219ENST00000560641 FDCSPQ8NFU4 85 aa12.29□□□□□ -0.44
PBX1-219ENST00000560641 B5MCH6 92 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 CNIH1O95406 144 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 SCGB1C2P0DMR2 95 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 SRSF9Q13242 221 aaKnown RBP eCLIP12.28□□□□□ -0.44
PBX1-219ENST00000560641 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
PBX1-219ENST00000560641 GAGE2BQ13066 116 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 GAGE2EQ4V326 116 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 C9orf47Q6ZRZ4 202 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 GAGE2DQ9UEU5 116 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 PRO1854Q9UHT4 67 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 SLC25A20O43772 301 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 MED14OSP0DP75 135 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 C22orf34Q6ZV56 151 aa12.28□□□□□ -0.44
PBX1-219ENST00000560641 IGLV4-69A0A075B6H9 119 aa12.27□□□□□ -0.44
PBX1-219ENST00000560641 PPP1R17O96001 155 aa12.27□□□□□ -0.44
PBX1-219ENST00000560641 SCGB1D4Q6XE38 83 aa12.27□□□□□ -0.44
PBX1-219ENST00000560641 LENEPQ9Y5L5 61 aa12.27□□□□□ -0.44
PBX1-219ENST00000560641 TRAV26-2A0A0B4J265 109 aa12.27□□□□□ -0.45
PBX1-219ENST00000560641 FAM90A27PA6NNH2 459 aa12.27□□□□□ -0.45
PBX1-219ENST00000560641 CRYGDP07320 174 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms