RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 OR2G3Q8NGZ4 309 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 TMEM14CQ9P0S9 112 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 FUT9Q9Y231 359 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 ICOSQ9Y6W8 199 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 MRPS12O15235 138 aaKnown RBP6.61□□□□□ -1.35
HERC1-209ENST00000560519 BCL2L11O43521 198 aa6.61□□□□□ -1.35
HERC1-209ENST00000560519 ICAM4Q14773 271 aa6.61□□□□□ -1.35
HERC1-209ENST00000560519 KHDC3LQ587J8 217 aa6.61□□□□□ -1.35
HERC1-209ENST00000560519 GCSAMLQ5JQS6 135 aa6.61□□□□□ -1.35
HERC1-209ENST00000560519 DNAH5Q8TE73 4624 aa6.61□□□□□ -1.35
HERC1-209ENST00000560519 TRAV5A0A0B4J249 113 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 TRAV12-3A0A0B4J271 114 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 A0A1B0GVG6 124 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 NPIPB6E9PJ23 425 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 ZNF253O75346 499 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 NXPH4O95158 308 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 SLC25A5P05141 298 aaKnown RBP6.6□□□□□ -1.35
HERC1-209ENST00000560519 IGLC2P0DOY2 106 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 HIST1H1EP10412 219 aaKnown RBP6.6□□□□□ -1.35
HERC1-209ENST00000560519 SLAQ13239 276 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 ZFP69Q49AA0 526 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 MORN5Q5VZ52 161 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 Q6ZTI0 123 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 TMUB2Q71RG4 321 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 MIR17HGQ75NE6 70 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 OR10G4Q8NGN3 311 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 OR10G9Q8NGN4 311 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 OR10G7Q8NGN6 311 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 MRPL53Q96EL3 112 aaKnown RBP6.6□□□□□ -1.35
HERC1-209ENST00000560519 VSIG2Q96IQ7 327 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 ZNF471Q9BX82 626 aaPredicted RBP6.6□□□□□ -1.35
HERC1-209ENST00000560519 OR51M1Q9H341 326 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 CYTL1Q9NRR1 136 aa6.6□□□□□ -1.35
HERC1-209ENST00000560519 TRGV1A0A0A0MS02 117 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 C7orf71A4D174 169 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 FAM229AH3BQW9 127 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 J3KRW8 73 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 OR7C2O60412 319 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 CDC34P49427 236 aaPredicted RBP6.59□□□□□ -1.35
HERC1-209ENST00000560519 RAB2AP61019 212 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 PDE6HQ13956 83 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 KIR3DS1Q14943 382 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 AKR1C8PQ5T2L2 129 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 IBA57Q5T440 356 aaKnown RBP6.59□□□□□ -1.35
HERC1-209ENST00000560519 FAM122CQ6P4D5 195 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 PQLC2Q6ZP29 291 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 LINC00467Q9BRT7 94 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 PAXXQ9BUH6 204 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 SLC25A2Q9BXI2 301 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 ACTR3CQ9C0K3 210 aaPredicted RBP6.59□□□□□ -1.35
HERC1-209ENST00000560519 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 PRO0255Q9UI72 69 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 LY96Q9Y6Y9 160 aa6.59□□□□□ -1.35
HERC1-209ENST00000560519 HERC1Q15751 4861 aa6.59□□□□□ -1.36
HERC1-209ENST00000560519 A0A087WTM6 91 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 UMAD1C9J7I0 102 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 SLC17A3O00476 420 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 PAX4O43316 350 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 SEC11BP0C7V7 166 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 TPT1P13693 172 aaKnown RBP6.58□□□□□ -1.36
HERC1-209ENST00000560519 XGP55808 180 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 TCL1AP56279 114 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 UBE2L3P68036 154 aaKnown RBP6.58□□□□□ -1.36
HERC1-209ENST00000560519 ANXA2RQ3ZCQ2 193 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 EIF5AL1Q6IS14 154 aaKnown RBP6.58□□□□□ -1.36
HERC1-209ENST00000560519 Q6ZSN1 163 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 EIF4E3Q8N5X7 224 aaKnown RBP6.58□□□□□ -1.36
HERC1-209ENST00000560519 FAM167A-AS1Q96KT0 104 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 AAMDCQ9H7C9 122 aa6.58□□□□□ -1.36
HERC1-209ENST00000560519 TRBV19A0A075B6N1 114 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 H3BQ15 152 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 ZNF324O75467 553 aaPredicted RBP6.57□□□□□ -1.36
HERC1-209ENST00000560519 NBEAP1P0C6P0 100 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 CT45A10P0DMU9 189 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 PYYP10082 97 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 EVI2AP22794 236 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 MRPL23Q16540 153 aaKnown RBP6.57□□□□□ -1.36
HERC1-209ENST00000560519 LGALSLQ3ZCW2 172 aaPredicted RBP6.57□□□□□ -1.36
HERC1-209ENST00000560519 SLC51BQ86UW2 128 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 C10orf126Q8N4M7 172 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 C11orf72Q8NBR9 251 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 STOML3Q8TAV4 291 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 BLNKQ8WV28 456 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 PCNPQ8WW12 178 aaKnown RBP6.57□□□□□ -1.36
HERC1-209ENST00000560519 RAB24Q969Q5 203 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 SAT2Q96F10 170 aaPredicted RBP6.57□□□□□ -1.36
HERC1-209ENST00000560519 VGLL1Q99990 258 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 GSN-AS1Q9NRJ2 163 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 PRELID1Q9Y255 219 aa6.57□□□□□ -1.36
HERC1-209ENST00000560519 CTXND1A0A1B0GTU2 59 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 KLLNB2CW77 178 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 PRAC2D3DTV9 90 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 H3BTX0 84 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 SPINK4O60575 86 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 CXorf1O96002 111 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 NMBP08949 121 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 SNRPCP09234 159 aaKnown RBP6.56□□□□□ -1.36
HERC1-209ENST00000560519 OR10J4P0C629 311 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 DNAH10OSP0CZ25 163 aa6.56□□□□□ -1.36
HERC1-209ENST00000560519 PRB4P10163 310 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms