RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 ZNF492Q9P255 531 aa4.8□□□□□ -1.64
SPG11-221ENST00000560299 ZNF256Q9Y2P7 627 aaPredicted RBP4.8□□□□□ -1.64
SPG11-221ENST00000560299 XKRY2A2RUG3 117 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 IZUMO1RA6ND01 250 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 CXorf65A6NEN9 183 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 PGPEP1LA6NFU8 196 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 FABP5P3A8MUU1 101 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 H7BYZ3 331 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 P01737 135 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 GPX1P07203 203 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 HLA-DRB4P13762 266 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 IGLL1P15814 213 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 S100PP25815 95 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 RPL19P84098 196 aaKnown RBP4.79□□□□□ -1.64
SPG11-221ENST00000560299 BEAN1Q3B7T3 259 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 ACTL10Q5JWF8 245 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 FAM162BQ5T6X4 162 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 PRR27Q6MZM9 219 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 COX8CQ7Z4L0 72 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 STHQ8IWL8 128 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 FAM24BQ8N5W8 94 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 OR10G8Q8NGN5 311 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 ISOC2Q96AB3 205 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 CLUHP3Q96NS8 147 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 ODF3Q96PU9 254 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 MLST8Q9BVC4 326 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 OSTCQ9NRP0 149 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 AURKAIP1Q9NWT8 199 aaPredicted RBP4.79□□□□□ -1.64
SPG11-221ENST00000560299 HLA-DRB4X5D2U9 266 aa4.79□□□□□ -1.64
SPG11-221ENST00000560299 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 ZNF705GA8MUZ8 300 aaPredicted RBP4.78□□□□□ -1.64
SPG11-221ENST00000560299 A8MWL6 223 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 F6UB75 175 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 H3BMM0 161 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 GATCO43716 136 aaKnown RBP4.78□□□□□ -1.64
SPG11-221ENST00000560299 IGLV2-8P01709 118 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 AMBPP02760 352 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 ZNF705DP0CH99 300 aaPredicted RBP4.78□□□□□ -1.64
SPG11-221ENST00000560299 ZNF705BP0CI00 300 aaPredicted RBP4.78□□□□□ -1.64
SPG11-221ENST00000560299 CRISP2P16562 243 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 CDKN1BP46527 198 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 OR5I1Q13606 314 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 RNF212Q495C1 297 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 KCNIP4Q6PIL6 250 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 FAM231DQ6ZW35 169 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 NHLRC2Q8NBF2 726 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 Q8TAT8 98 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 BTF3L4Q96K17 158 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 SMCO4Q9NRQ5 59 aa4.78□□□□□ -1.64
SPG11-221ENST00000560299 TRAV21A0A0B4J279 112 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 KNCNA6PVL3 124 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 K7EN84 100 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 PFN1P07737 140 aaKnown RBP4.77□□□□□ -1.65
SPG11-221ENST00000560299 PRB4P10163 310 aaPredicted RBP4.77□□□□□ -1.65
SPG11-221ENST00000560299 RPS20P60866 119 aaKnown RBP4.77□□□□□ -1.65
SPG11-221ENST00000560299 ODF3L2Q3SX64 289 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 CT83Q5H943 113 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 APRG1Q8IVJ8 170 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 NUDT10Q8NFP7 164 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 NUDT11Q96G61 164 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 ZC2HC1AQ96GY0 325 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 C8orf49Q96NF6 230 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 IMMP2LQ96T52 175 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 KRTAP4-7Q9BYR0 210 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 RNASE7Q9H1E1 156 aaKnown RBP4.77□□□□□ -1.65
SPG11-221ENST00000560299 RPP21Q9H633 154 aaKnown RBP4.77□□□□□ -1.65
SPG11-221ENST00000560299 TUBA4BQ9H853 241 aa4.77□□□□□ -1.65
SPG11-221ENST00000560299 AGRNO00468 2067 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 TMEM189A5PLL7 270 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 C19orf71A6NCJ1 209 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 FAM231BA6NCW3 169 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 A8MTW9 85 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 KLLNB2CW77 178 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 J3KRW8 73 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 SH2D1AO60880 128 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 IGKV3-20P01619 116 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 ORM1P02763 201 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 CD7P09564 240 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 RNASE4P34096 147 aaKnown RBP4.76□□□□□ -1.65
SPG11-221ENST00000560299 DEFB1P60022 68 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 GDF5OSQ5U4N7 250 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 MORN3Q6PF18 240 aaPredicted RBP4.76□□□□□ -1.65
SPG11-221ENST00000560299 ATRAIDQ6UW56 229 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 ZFAND2AQ8N6M9 145 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 OR2D3Q8NGH3 330 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 KCNS1Q96KK3 526 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 FAM19A4Q96LR4 140 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 C20orf144Q9BQM9 153 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 C1QTNF4Q9BXJ3 329 aa4.76□□□□□ -1.65
SPG11-221ENST00000560299 TRAV9-1A0A075B6T8 112 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 C7orf71A4D174 169 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 BTN1A1Q13410 526 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 SPINK13Q1W4C9 94 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 Q6AWC8 147 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 FAM159AQ6UWV7 190 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 TSKUQ8WUA8 353 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 BORCS7Q96B45 105 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 GFRA4Q9GZZ7 299 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 C19orf73Q9NVV2 129 aa4.75□□□□□ -1.65
SPG11-221ENST00000560299 IL36BQ9NZH7 164 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms