RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PAX4O43316 350 aa8.59□□□□□ -1.03
RABGGTA-213ENST00000560127 OXTP01178 125 aa8.59□□□□□ -1.03
RABGGTA-213ENST00000560127 C1QBP02746 253 aa8.59□□□□□ -1.03
RABGGTA-213ENST00000560127 MIR17HGQ75NE6 70 aa8.59□□□□□ -1.03
RABGGTA-213ENST00000560127 WFDC10BQ8IUB3 73 aa8.59□□□□□ -1.03
RABGGTA-213ENST00000560127 SAT2Q96F10 170 aaPredicted RBP8.59□□□□□ -1.03
RABGGTA-213ENST00000560127 SLC25A2Q9BXI2 301 aa8.59□□□□□ -1.03
RABGGTA-213ENST00000560127 SMLR1H3BR10 107 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 K7EP13 123 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 EIF3GO75821 320 aaKnown RBP eCLIP8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 NDUFB4O95168 129 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 PYYP10082 97 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 S100A7P31151 101 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 RAB31Q13636 194 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 Q6ZSA8 131 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 C11orf72Q8NBR9 251 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 ZNF331Q9NQX6 463 aaPredicted RBP8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 TNFSF18Q9UNG2 199 aa8.58□□□□□ -1.04
RABGGTA-213ENST00000560127 PRAC2D3DTV9 90 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 EVI2AP22794 236 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 KRTAP10-4P60372 401 aaPredicted RBP8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 Q6ZRG5 221 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 Q8N814 137 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 OR1L4Q8NGR5 311 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 OR2T35Q8NGX2 323 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 LRRC20Q8TCA0 184 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 PFDN5Q99471 154 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 PYGO2Q9BRQ0 406 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 GSN-AS1Q9NRJ2 163 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 FUT9Q9Y231 359 aa8.57□□□□□ -1.04
RABGGTA-213ENST00000560127 TRGV1A0A0A0MS02 117 aa8.56□□□□□ -1.04
RABGGTA-213ENST00000560127 TRAV12-3A0A0B4J271 114 aa8.56□□□□□ -1.04
RABGGTA-213ENST00000560127 J3KRW8 73 aa8.56□□□□□ -1.04
RABGGTA-213ENST00000560127 LCN15Q6UWW0 184 aa8.56□□□□□ -1.04
RABGGTA-213ENST00000560127 BPIFA4PQ86YQ2 179 aa8.56□□□□□ -1.04
RABGGTA-213ENST00000560127 ASB13Q8WXK3 278 aa8.56□□□□□ -1.04
RABGGTA-213ENST00000560127 TMEM14CQ9P0S9 112 aa8.56□□□□□ -1.04
RABGGTA-213ENST00000560127 TRBV19A0A075B6N1 114 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 IGHV3-53P01767 116 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 CRYGDP07320 174 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 CXCL2P19875 107 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 CRYBA4P53673 196 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 RAB2AP61019 212 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 MRPL23Q16540 153 aaKnown RBP8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 FFAR4Q5NUL3 377 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 NEGR1Q7Z3B1 354 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 OR11H4Q8NGC9 324 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 FXYD5Q96DB9 178 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 ST6GAL2Q96JF0 529 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 PRO0255Q9UI72 69 aa8.55□□□□□ -1.04
RABGGTA-213ENST00000560127 FXYD6-FXYD2A0A087WZ82 144 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 M0R3E3 92 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 PSCAO43653 123 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 SPINK4O60575 86 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 CT45A10P0DMU9 189 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 ZNF680Q8NEM1 530 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 C8orf49Q96NF6 230 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 SH3BGRL3Q9H299 93 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 KLF12Q9Y4X4 402 aa8.54□□□□□ -1.04
RABGGTA-213ENST00000560127 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 FHL2Q14192 279 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 RPL7L1Q6DKI1 246 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 C10orf126Q8N4M7 172 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 HSD17B11Q8NBQ5 300 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 SLC50A1Q9BRV3 221 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 MRPL32Q9BYC8 188 aaKnown RBP8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 CYTL1Q9NRR1 136 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 KCNIP2Q9NS61 270 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 HHLA3Q9XRX5 114 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 TIMM9Q9Y5J7 89 aa8.53□□□□□ -1.04
RABGGTA-213ENST00000560127 C17orf112F2Z3M2 114 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 ZNF253O75346 499 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 OR10J4P0C629 311 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 ATP6V0CP27449 155 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 LEPP41159 167 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 Q6ZNX1 250 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 S100A7AQ86SG5 101 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 EXOC3-AS1Q8N2X6 119 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 OR2G3Q8NGZ4 309 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
RABGGTA-213ENST00000560127 K7EQD1 137 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 SRIP30626 198 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 TCL1AP56279 114 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 SLAQ13239 276 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 GUK1Q16774 197 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 ANXA2RQ3ZCQ2 193 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 SCGB1C1Q8TD33 95 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 BLNKQ8WV28 456 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 RNF24Q9Y225 148 aa8.51□□□□□ -1.05
RABGGTA-213ENST00000560127 ARPC5O15511 151 aa8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 PDE6HQ13956 83 aa8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 SCXQ7RTU7 201 aa8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 VGLL1Q99990 258 aa8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 PSMG3Q9BT73 122 aaPredicted RBP8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 PAXXQ9BUH6 204 aa8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 OR51M1Q9H341 326 aa8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 MRPL16Q9NX20 251 aaKnown RBP8.5□□□□□ -1.05
RABGGTA-213ENST00000560127 C7orf71A4D174 169 aa8.49□□□□□ -1.05
RABGGTA-213ENST00000560127 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms