RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 DKK2Q9UBU2 259 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 TP53TG3Q9ULZ0 132 aa6.11□□□□□ -1.43
USP3-217ENST00000560070 TRAV10A0A0B4J240 114 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 GGTLC3B5MD39 225 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 RGS13O14921 159 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 PAGE4O60829 102 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 H2AFB1P0C5Y9 115 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 CRISP2P16562 243 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 PRNTQ86SH4 94 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 C2CD4CQ8TF44 421 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 TVP23CQ96ET8 276 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 TREM1Q9NP99 234 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 GSN-AS1Q9NRJ2 163 aa6.1□□□□□ -1.43
USP3-217ENST00000560070 TIMM8BQ9Y5J9 83 aaPredicted RBP6.1□□□□□ -1.43
USP3-217ENST00000560070 A0A1W2PRE2 83 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 GAGE12BA1L429 117 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 PLAC8L1A1L4L8 177 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 FAM74A7A6NL05 159 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 KLLNB2CW77 178 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 UMAD1C9J7I0 102 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 GAGE7O76087 117 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 LY6G6CO95867 125 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 TCRAP04437 139 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 GAGE12FP0CL80 117 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 GAGE12GP0CL81 117 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 GAGE12IP0CL82 117 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 CCL20P78556 96 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 C9orf62Q8N4C0 152 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 C5orf17Q8NAS9 161 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 MBD3L1Q8WWY6 194 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 C16orf74Q96GX8 76 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 C8orf49Q96NF6 230 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 C20orf144Q9BQM9 153 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 PYGO2Q9BRQ0 406 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 NAGKQ9UJ70 344 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 PSG8Q9UQ74 426 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 KLF12Q9Y4X4 402 aa6.09□□□□□ -1.43
USP3-217ENST00000560070 IGHV1OR15-1A0A075B7D0 117 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 SNURFLB1AK76 121 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 C11orf94C9JXX5 98 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 F5H768 121 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 K7EQM0 130 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 GNRH2O43555 120 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 ATP5G3P48201 142 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 ZNF493Q6ZR52 646 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 SLC51BQ86UW2 128 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 EIF4E3Q8N5X7 224 aaKnown RBP6.08□□□□□ -1.44
USP3-217ENST00000560070 RNASE8Q8TDE3 154 aaKnown RBP6.08□□□□□ -1.44
USP3-217ENST00000560070 TMEM263Q8WUH6 116 aaKnown RBP6.08□□□□□ -1.44
USP3-217ENST00000560070 NDFIP1Q9BT67 221 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 STAB2Q8WWQ8 2551 aa6.08□□□□□ -1.44
USP3-217ENST00000560070 AGRNO00468 2067 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 IGHV4-4A0A075B6R2 117 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 LCE6AA0A183 80 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 TEX48A0A1B0GUV7 120 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 LYRM9A8MSI8 78 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 PEX7O00628 323 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 NMBP08949 121 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 ZNF80P51504 273 aaPredicted RBP6.07□□□□□ -1.44
USP3-217ENST00000560070 FLI1Q01543 452 aaPredicted RBP6.07□□□□□ -1.44
USP3-217ENST00000560070 TMEM183BQ1AE95 376 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 EIF5AL1Q6IS14 154 aaKnown RBP6.07□□□□□ -1.44
USP3-217ENST00000560070 FAM159AQ6UWV7 190 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 DPPA3Q6W0C5 159 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 TMEM183AQ8IXX5 376 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 ARL6IP6Q8N6S5 226 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 CYB561D1Q8N8Q1 229 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 ATG101Q9BSB4 218 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 MDFICQ9P1T7 246 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 GNG13Q9P2W3 67 aa6.07□□□□□ -1.44
USP3-217ENST00000560070 TRGV1A0A0A0MS02 117 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 TRAV21A0A0B4J279 112 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 SERTM2A0A1B0GWG4 89 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 IGLV2-11P01706 119 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 SULT1A2P50226 295 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 OR5I1Q13606 314 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 ANXA2RQ3ZCQ2 193 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 ALKAL2Q6UX46 152 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 Q6ZTI0 123 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 MRPL16Q9NX20 251 aaKnown RBP6.06□□□□□ -1.44
USP3-217ENST00000560070 APLNQ9ULZ1 77 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
USP3-217ENST00000560070 TRGV2A0A075B6R0 118 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 TRBV7-9A0A0J9YWB2 115 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 GCGP01275 180 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 IGHV3-53P01767 116 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 PPT1P50897 306 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 RAB5CP51148 216 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 UBE2G1P62253 170 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 SMUG1Q53HV7 270 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 SAPCD1Q5SSQ6 148 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 Q6AWC8 147 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 TMEM88Q6PEY1 159 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 TMEM75Q8N9X5 138 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 C11orf72Q8NBR9 251 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 LINC00467Q9BRT7 94 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 NKX6-2Q9C056 277 aaPredicted RBP6.05□□□□□ -1.44
USP3-217ENST00000560070 C11orf21Q9P2W6 132 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 ARL2-SNX15V9GYD0 113 aa6.05□□□□□ -1.44
USP3-217ENST00000560070 DNAH7Q8WXX0 4024 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms