RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 IGHV3-53P01767 116 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 RPL12P30050 165 aaKnown RBP8.72□□□□□ -1.01
SNX1-209ENST00000559961 MRPL23Q16540 153 aaKnown RBP8.72□□□□□ -1.01
SNX1-209ENST00000559961 ACOT6Q3I5F7 207 aaPredicted RBP8.72□□□□□ -1.01
SNX1-209ENST00000559961 C11orf72Q8NBR9 251 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 FXYD5Q96DB9 178 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 FAM167A-AS1Q96KT0 104 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 HYLS1Q96M11 299 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 SPXQ9BT56 116 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 PTTG2Q9NZH5 202 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 HHLA3Q9XRX5 114 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 HSPB11Q9Y547 144 aa8.72□□□□□ -1.01
SNX1-209ENST00000559961 MRPL16Q9NX20 251 aaKnown RBP8.71□□□□□ -1.02
SNX1-209ENST00000559961 LENEPQ9Y5L5 61 aa8.71□□□□□ -1.02
SNX1-209ENST00000559961 A0A096LPF7 62 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 CDK2AP2O75956 126 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 MPC2O95563 127 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 ZNF266Q14584 549 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 MUC21Q5SSG8 566 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 SPATA12Q7Z6I5 190 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 ZFAND2AQ8N6M9 145 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 PHYHIPLQ96FC7 376 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 MARVELD1Q9BSK0 173 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 SMIM3Q9BZL3 60 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 OTORQ9NRC9 128 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 MBD2Q9UBB5 411 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 NAGKQ9UJ70 344 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 RPH3ALQ9UNE2 315 aa8.7□□□□□ -1.02
SNX1-209ENST00000559961 PGPA6NDG6 321 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 DIRC3C9JPN6 131 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 H0YIZ8 118 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 ORM1P02763 201 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 SRIP30626 198 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 TMEM183BQ1AE95 376 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 PQLC2Q6ZP29 291 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 NEGR1Q7Z3B1 354 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 NFE4Q86UQ8 179 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 TMEM183AQ8IXX5 376 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 Q8TAT8 98 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 C8orf49Q96NF6 230 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 NDFIP1Q9BT67 221 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 TP53TG3Q9ULZ0 132 aa8.69□□□□□ -1.02
SNX1-209ENST00000559961 K7EQM0 130 aa8.68□□□□□ -1.02
SNX1-209ENST00000559961 NXPH4O95158 308 aa8.68□□□□□ -1.02
SNX1-209ENST00000559961 H2BFSP57053 126 aa8.68□□□□□ -1.02
SNX1-209ENST00000559961 TMED6Q8WW62 240 aa8.68□□□□□ -1.02
SNX1-209ENST00000559961 TXNDC17Q9BRA2 123 aa8.68□□□□□ -1.02
SNX1-209ENST00000559961 DNAH2Q9P225 4427 aa8.68□□□□□ -1.02
SNX1-209ENST00000559961 KIAA1109Q2LD37 5005 aa8.68□□□□□ -1.02
SNX1-209ENST00000559961 TRAV21A0A0B4J279 112 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 EVI2AP22794 236 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 CRYBA4P53673 196 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 PRR9Q5T870 116 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 ARL6IP6Q8N6S5 226 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 MAPKAPK5-AS1Q8N8E1 139 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 OR4C5Q8NGB2 326 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 KCNS1Q96KK3 526 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 DNAH17Q9UFH2 4485 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 FAT2Q9NYQ8 4349 aa8.67□□□□□ -1.02
SNX1-209ENST00000559961 NACAE9PAV3 2078 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 C9JCJ5 164 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 K7EP13 123 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 LINC00315P59091 139 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 ERVFC1-1P60608 527 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 Q6AWC8 147 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 LYPD5Q6UWN5 251 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 OR10G4Q8NGN3 311 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 OR10G9Q8NGN4 311 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 OR10G7Q8NGN6 311 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 SDF2L1Q9HCN8 221 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 TREM1Q9NP99 234 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 PGPEP1Q9NXJ5 209 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
SNX1-209ENST00000559961 SERTM2A0A1B0GWG4 89 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 M0R2P5 195 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 MBP02144 154 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 GYPEP15421 78 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 FHL2Q14192 279 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 GOLT1AQ6ZVE7 132 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 IQCF2Q8IXL9 164 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 RASL10AQ92737 203 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 MDFICQ9P1T7 246 aa8.65□□□□□ -1.02
SNX1-209ENST00000559961 TRAV4A0A0B4J268 109 aa8.64□□□□□ -1.03
SNX1-209ENST00000559961 A6NHS1 94 aa8.64□□□□□ -1.03
SNX1-209ENST00000559961 IFITM3Q01628 133 aa8.64□□□□□ -1.03
SNX1-209ENST00000559961 ZFP69Q49AA0 526 aa8.64□□□□□ -1.03
SNX1-209ENST00000559961 NHLRC2Q8NBF2 726 aa8.64□□□□□ -1.03
SNX1-209ENST00000559961 K7EQD1 137 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 SFTA3P0C7M3 94 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 CDC34P49427 236 aaPredicted RBP8.63□□□□□ -1.03
SNX1-209ENST00000559961 TDRG1Q3Y452 100 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 Q6ZQT7 251 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 C10orf126Q8N4M7 172 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 ASB13Q8WXK3 278 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 ZNF479Q96JC4 524 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 KRTAP1-5Q9BYS1 174 aa8.63□□□□□ -1.03
SNX1-209ENST00000559961 DNAH11Q96DT5 4516 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms