RNA–Protein interactions for RNA: ENST00000559790.1

CDC42BPB-206, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-206ENST00000559790 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 PAXXQ9BUH6 204 aa12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 MDFICQ9P1T7 246 aa12.79□□□□□ -0.36
CDC42BPB-206ENST00000559790 VPS13BQ7Z7G8 4022 aa12.78□□□□□ -0.36
CDC42BPB-206ENST00000559790 RGS13O14921 159 aa12.78□□□□□ -0.36
CDC42BPB-206ENST00000559790 SIVA1O15304 175 aa12.78□□□□□ -0.36
CDC42BPB-206ENST00000559790 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
CDC42BPB-206ENST00000559790 RBAKDNA6NC62 111 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 PAX4O43316 350 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 UPK1BO75841 260 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 MUC21Q5SSG8 566 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 Q6AWC8 147 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 MZT2BQ6NZ67 158 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 C8orf49Q96NF6 230 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 PRO0255Q9UI72 69 aa12.77□□□□□ -0.37
CDC42BPB-206ENST00000559790 SFTA3P0C7M3 94 aa12.76□□□□□ -0.37
CDC42BPB-206ENST00000559790 LYPD5Q6UWN5 251 aa12.76□□□□□ -0.37
CDC42BPB-206ENST00000559790 ZNF479Q96JC4 524 aa12.76□□□□□ -0.37
CDC42BPB-206ENST00000559790 ATP5SQ99766 215 aa12.76□□□□□ -0.37
CDC42BPB-206ENST00000559790 SLC25A31Q9H0C2 315 aa12.76□□□□□ -0.37
CDC42BPB-206ENST00000559790 HERC1Q15751 4861 aa12.76□□□□□ -0.37
CDC42BPB-206ENST00000559790 DNAH10OSP0CZ25 163 aa12.75□□□□□ -0.37
CDC42BPB-206ENST00000559790 UBE2L3P68036 154 aaKnown RBP12.75□□□□□ -0.37
CDC42BPB-206ENST00000559790 ZNF415Q09FC8 603 aa12.75□□□□□ -0.37
CDC42BPB-206ENST00000559790 PPP1R1CQ8WVI7 109 aa12.75□□□□□ -0.37
CDC42BPB-206ENST00000559790 SCRT2Q9NQ03 307 aa12.75□□□□□ -0.37
CDC42BPB-206ENST00000559790 HSPB11Q9Y547 144 aa12.75□□□□□ -0.37
CDC42BPB-206ENST00000559790 DIRC3C9JPN6 131 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 OR7C2O60412 319 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 PRAF2O60831 178 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 RANP62826 216 aaKnown RBP12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 WFDC10BQ8IUB3 73 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 OR10G4Q8NGN3 311 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 TVP23CQ96ET8 276 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 WFDC1Q9HC57 220 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 KCNIP2Q9NS61 270 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 HHLA3Q9XRX5 114 aa12.74□□□□□ -0.37
CDC42BPB-206ENST00000559790 IQCF2Q8IXL9 164 aa12.73□□□□□ -0.37
CDC42BPB-206ENST00000559790 LYPD1Q8N2G4 141 aa12.73□□□□□ -0.37
CDC42BPB-206ENST00000559790 S100ZQ8WXG8 99 aa12.73□□□□□ -0.37
CDC42BPB-206ENST00000559790 RASL10AQ92737 203 aa12.73□□□□□ -0.37
CDC42BPB-206ENST00000559790 ARPC5LQ9BPX5 153 aa12.73□□□□□ -0.37
CDC42BPB-206ENST00000559790 MARVELD1Q9BSK0 173 aa12.73□□□□□ -0.37
CDC42BPB-206ENST00000559790 K7EQD1 137 aa12.72□□□□□ -0.37
CDC42BPB-206ENST00000559790 MPC2O95563 127 aa12.72□□□□□ -0.37
CDC42BPB-206ENST00000559790 XGP55808 180 aa12.72□□□□□ -0.37
CDC42BPB-206ENST00000559790 TDRG1Q3Y452 100 aa12.72□□□□□ -0.37
CDC42BPB-206ENST00000559790 FFAR4Q5NUL3 377 aa12.72□□□□□ -0.37
CDC42BPB-206ENST00000559790 LENEPQ9Y5L5 61 aa12.72□□□□□ -0.37
CDC42BPB-206ENST00000559790 INMT-MINDY4F8WBC2 141 aa12.71□□□□□ -0.37
CDC42BPB-206ENST00000559790 MRPL23Q16540 153 aaKnown RBP12.71□□□□□ -0.37
CDC42BPB-206ENST00000559790 TMEM183BQ1AE95 376 aa12.71□□□□□ -0.37
CDC42BPB-206ENST00000559790 TMEM183AQ8IXX5 376 aa12.71□□□□□ -0.37
CDC42BPB-206ENST00000559790 LOC100131303A0A0U1RQF7 123 aa12.7□□□□□ -0.38
CDC42BPB-206ENST00000559790 KHDC3LQ587J8 217 aa12.7□□□□□ -0.38
CDC42BPB-206ENST00000559790 NEGR1Q7Z3B1 354 aa12.7□□□□□ -0.38
CDC42BPB-206ENST00000559790 TMED6Q8WW62 240 aa12.7□□□□□ -0.38
CDC42BPB-206ENST00000559790 SMIM3Q9BZL3 60 aa12.7□□□□□ -0.38
CDC42BPB-206ENST00000559790 DMBT1Q9UGM3 2413 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 FLG2Q5D862 2391 aaPredicted RBP12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 A0A087WTM6 91 aa12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 TRAV8-1A0A0A6YYK1 113 aa12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 IGHV3-16A0A0C4DH30 117 aa12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 C17orf112F2Z3M2 114 aa12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 KRTAP10-1P60331 282 aa12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 CYCSP99999 105 aaKnown RBP12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 MBD2Q9UBB5 411 aa12.69□□□□□ -0.38
CDC42BPB-206ENST00000559790 MYCBP2O75592 4640 aa12.68□□□□□ -0.38
CDC42BPB-206ENST00000559790 GYPEP15421 78 aa12.68□□□□□ -0.38
CDC42BPB-206ENST00000559790 RAB2AP61019 212 aa12.68□□□□□ -0.38
CDC42BPB-206ENST00000559790 SLAQ13239 276 aa12.68□□□□□ -0.38
CDC42BPB-206ENST00000559790 OTORQ9NRC9 128 aa12.68□□□□□ -0.38
CDC42BPB-206ENST00000559790 A6NHS1 94 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 F6UZH7 168 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 GNRH2O43555 120 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 TYMSP04818 313 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 RPL12P30050 165 aaKnown RBP12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 CSN1S1P47710 185 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 ERVFC1-1P60608 527 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 GNG5P63218 68 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 SPXQ9BT56 116 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 C11orf21Q9P2W6 132 aa12.67□□□□□ -0.38
CDC42BPB-206ENST00000559790 TRGV11A0A075B6L2 103 aa12.66□□□□□ -0.38
CDC42BPB-206ENST00000559790 TRAV4A0A0B4J268 109 aa12.66□□□□□ -0.38
CDC42BPB-206ENST00000559790 TRGV4A0A0C4DH28 118 aa12.66□□□□□ -0.38
CDC42BPB-206ENST00000559790 CDPF1Q6NVV7 123 aa12.66□□□□□ -0.38
CDC42BPB-206ENST00000559790 GOLT1AQ6ZVE7 132 aa12.66□□□□□ -0.38
CDC42BPB-206ENST00000559790 HYLS1Q96M11 299 aa12.66□□□□□ -0.38
CDC42BPB-206ENST00000559790 DNAH8Q96JB1 4490 aa12.65□□□□□ -0.38
CDC42BPB-206ENST00000559790 SRIP30626 198 aa12.65□□□□□ -0.38
CDC42BPB-206ENST00000559790 PTTG2Q9NZH5 202 aa12.65□□□□□ -0.38
CDC42BPB-206ENST00000559790 NAGKQ9UJ70 344 aa12.65□□□□□ -0.38
CDC42BPB-206ENST00000559790 RPH3ALQ9UNE2 315 aa12.65□□□□□ -0.38
CDC42BPB-206ENST00000559790 LY96Q9Y6Y9 160 aa12.65□□□□□ -0.38
CDC42BPB-206ENST00000559790 SRRM2Q9UQ35 2752 aaKnown RBP12.65□□□□□ -0.38
CDC42BPB-206ENST00000559790 PGPA6NDG6 321 aa12.64□□□□□ -0.39
CDC42BPB-206ENST00000559790 GATA1P15976 413 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPB-206ENST00000559790 ZNF80P51504 273 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPB-206ENST00000559790 TAS2R45P59539 299 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms