RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PRSS29PA6NIE9 313 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 ZFP92A6NM28 416 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 ZNF727A8MUV8 499 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 PRSS46E5RG02 174 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 M0R2N4 97 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 PPP1R2P9O14990 202 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 CXorf1O96002 111 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 S100A9P06702 114 aaKnown RBP4.12□□□□□ -1.75
USP3-215ENST00000559771 SMIM6P0DI80 62 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 S100PP25815 95 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 NPY1RP25929 384 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 GPX4P36969 197 aaPredicted RBP4.12□□□□□ -1.75
USP3-215ENST00000559771 CDC34P49427 236 aaPredicted RBP4.12□□□□□ -1.75
USP3-215ENST00000559771 SUB1P53999 127 aaKnown RBP eCLIP4.12□□□□□ -1.75
USP3-215ENST00000559771 ELOBQ15370 118 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 SLC24A4Q8NFF2 622 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 NPIPB3Q92617 1050 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 RAB24Q969Q5 203 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 SLC35E1Q96K37 410 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 C17orf77Q96MU5 243 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 SMIM7Q9BQ49 75 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 SAV1Q9H4B6 383 aaPredicted RBP4.12□□□□□ -1.75
USP3-215ENST00000559771 XCL2Q9UBD3 114 aa4.12□□□□□ -1.75
USP3-215ENST00000559771 IGKV1D-37A0A075B6S9 117 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 TRAV9-1A0A075B6T8 112 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 TRAV30A0A087WSZ9 112 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 A0A1B0GV50 99 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 SOCS3O14543 225 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 TOMM40O96008 361 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 IL4P05112 153 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 STAG3L2P0CL84 134 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 STAG3L3P0CL85 134 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 PSG1P11464 419 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 HLA-DRB4P13762 266 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 OR10J1P30954 320 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 MEOX2P50222 304 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 FXYD7P58549 80 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 RHOBP62745 196 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 LGALS9BQ3B8N2 356 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 TMEM144Q7Z5S9 345 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 RNASEH2CQ8TDP1 164 aaKnown RBP4.11□□□□□ -1.75
USP3-215ENST00000559771 RPUSD4Q96CM3 377 aaKnown RBP4.11□□□□□ -1.75
USP3-215ENST00000559771 NEU1Q99519 415 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 PYGO2Q9BRQ0 406 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 SEPSECSQ9HD40 501 aaKnown RBP4.11□□□□□ -1.75
USP3-215ENST00000559771 NRN1Q9NPD7 142 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 TMEM167BQ9NRX6 74 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 RFNGQ9Y644 331 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 LY96Q9Y6Y9 160 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 HLA-DRB4X5D2U9 266 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
USP3-215ENST00000559771 MUC4Q99102 2169 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 ZNF98A6NK75 572 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 P0DMU3 169 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 FAM231AP0DMU4 169 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 FAM231CP0DMU5 169 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 AKR1C3P42330 323 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 RPS10P46783 165 aaKnown RBP4.1□□□□□ -1.75
USP3-215ENST00000559771 FGF8P55075 233 aaPredicted RBP4.1□□□□□ -1.75
USP3-215ENST00000559771 TAS2R45P59539 299 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 B2MP61769 119 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 SELENOTP62341 195 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 RPL19P84098 196 aaKnown RBP4.1□□□□□ -1.75
USP3-215ENST00000559771 DNLZQ5SXM8 178 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 ETFRF1Q6IPR1 90 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 KCNIP4Q6PIL6 250 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 SIGLEC15Q6ZMC9 328 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 PQLC2Q6ZP29 291 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 C1orf158Q8N1D5 194 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 OR51G1Q8NGK1 321 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 NTN5Q8WTR8 489 aaPredicted RBP4.1□□□□□ -1.75
USP3-215ENST00000559771 Q8WTZ3 238 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 ISOC2Q96AB3 205 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 FAM210BQ96KR6 192 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 MGST2Q99735 147 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 NDUFAF3Q9BU61 184 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 SLC25A22Q9H936 323 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 DKK2Q9UBU2 259 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 SLC45A2Q9UMX9 530 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 PXMP4Q9Y6I8 212 aa4.1□□□□□ -1.75
USP3-215ENST00000559771 IGLV2-18A0A075B6J9 118 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 IGKV1OR2-108A0A075B7D4 117 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 SMIM9A6NGZ8 99 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 A8MTW9 85 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 C9JCJ5 164 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 F6UB75 175 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 H7BYZ3 331 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 PAGE4O60829 102 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 IGKV3-20P01619 116 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 PRM2P04554 102 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 TYMSP04818 313 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 PFN1P07737 140 aaKnown RBP4.09□□□□□ -1.75
USP3-215ENST00000559771 SPART-AS1P0CW21 52 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 RD3LP0DJH9 198 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 AKR1D1P51857 326 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 CEBPGP53567 150 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 EMP1P54849 157 aa4.09□□□□□ -1.75
USP3-215ENST00000559771 FAM3BP58499 235 aaPredicted RBP4.09□□□□□ -1.75
USP3-215ENST00000559771 SNRPEP62304 92 aaKnown RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms