RNA–Protein interactions for RNA: ENST00000559604.1

KNSTRN-208, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 4

Gene KNSTRN, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-208ENST00000559604 PET100P0DJ07 73 aa13.18□□□□□ -0.3
KNSTRN-208ENST00000559604 DEFA1P59665 94 aa13.18□□□□□ -0.3
KNSTRN-208ENST00000559604 DEFA3P59666 94 aa13.18□□□□□ -0.3
KNSTRN-208ENST00000559604 UBE2L3P68036 154 aaKnown RBP13.18□□□□□ -0.3
KNSTRN-208ENST00000559604 LYPD1Q8N2G4 141 aa13.18□□□□□ -0.3
KNSTRN-208ENST00000559604 Q9H3A6 140 aa13.18□□□□□ -0.3
KNSTRN-208ENST00000559604 MRPS16Q9Y3D3 137 aaKnown RBP13.18□□□□□ -0.3
KNSTRN-208ENST00000559604 A0A096LPF7 62 aa13.17□□□□□ -0.3
KNSTRN-208ENST00000559604 RBAKDNA6NC62 111 aa13.17□□□□□ -0.3
KNSTRN-208ENST00000559604 CSN1S1P47710 185 aa13.17□□□□□ -0.3
KNSTRN-208ENST00000559604 MBD2Q9UBB5 411 aa13.17□□□□□ -0.3
KNSTRN-208ENST00000559604 EIF3GO75821 320 aaKnown RBP eCLIP13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 IFNA5P01569 189 aa13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 KHDC3LQ587J8 217 aa13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 TTC32Q5I0X7 151 aa13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 SCGB1C1Q8TD33 95 aa13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 ST6GAL2Q96JF0 529 aa13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 WFDC1Q9HC57 220 aa13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 MRPL16Q9NX20 251 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-208ENST00000559604 DIRC3C9JPN6 131 aa13.15□□□□□ -0.3
KNSTRN-208ENST00000559604 ZNF266Q14584 549 aa13.15□□□□□ -0.3
KNSTRN-208ENST00000559604 ARPC5LQ9BPX5 153 aa13.15□□□□□ -0.3
KNSTRN-208ENST00000559604 APOBP04114 4563 aaKnown RBP13.15□□□□□ -0.31
KNSTRN-208ENST00000559604 IGHV3-53P01767 116 aa13.14□□□□□ -0.31
KNSTRN-208ENST00000559604 TAS2R45P59539 299 aa13.14□□□□□ -0.31
KNSTRN-208ENST00000559604 MUC21Q5SSG8 566 aa13.14□□□□□ -0.31
KNSTRN-208ENST00000559604 A0A1W2PPQ1 181 aa13.13□□□□□ -0.31
KNSTRN-208ENST00000559604 C16orf90A8MZG2 172 aa13.13□□□□□ -0.31
KNSTRN-208ENST00000559604 PAX4O43316 350 aa13.12□□□□□ -0.31
KNSTRN-208ENST00000559604 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
KNSTRN-208ENST00000559604 Q6AWC8 147 aa13.12□□□□□ -0.31
KNSTRN-208ENST00000559604 HYLS1Q96M11 299 aa13.12□□□□□ -0.31
KNSTRN-208ENST00000559604 MDFICQ9P1T7 246 aa13.12□□□□□ -0.31
KNSTRN-208ENST00000559604 LENEPQ9Y5L5 61 aa13.12□□□□□ -0.31
KNSTRN-208ENST00000559604 FHL2Q14192 279 aa13.11□□□□□ -0.31
KNSTRN-208ENST00000559604 OTORQ9NRC9 128 aa13.11□□□□□ -0.31
KNSTRN-208ENST00000559604 PRO0255Q9UI72 69 aa13.11□□□□□ -0.31
KNSTRN-208ENST00000559604 PGPA6NDG6 321 aa13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 CRYBA4P53673 196 aa13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 RAB2AP61019 212 aa13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 ACOT6Q3I5F7 207 aaPredicted RBP13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 TMED6Q8WW62 240 aa13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 HHLA3Q9XRX5 114 aa13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 ALG5Q9Y673 324 aa13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 ICOSQ9Y6W8 199 aa13.1□□□□□ -0.31
KNSTRN-208ENST00000559604 TMEM183BQ1AE95 376 aa13.09□□□□□ -0.31
KNSTRN-208ENST00000559604 PQLC2Q6ZP29 291 aa13.09□□□□□ -0.31
KNSTRN-208ENST00000559604 TMEM183AQ8IXX5 376 aa13.09□□□□□ -0.31
KNSTRN-208ENST00000559604 C8orf49Q96NF6 230 aa13.09□□□□□ -0.31
KNSTRN-208ENST00000559604 RPH3ALQ9UNE2 315 aa13.09□□□□□ -0.31
KNSTRN-208ENST00000559604 BTF3P20290 206 aaKnown RBP13.08□□□□□ -0.32
KNSTRN-208ENST00000559604 SLAQ13239 276 aa13.08□□□□□ -0.32
KNSTRN-208ENST00000559604 FAM159AQ6UWV7 190 aa13.08□□□□□ -0.32
KNSTRN-208ENST00000559604 SPATA12Q7Z6I5 190 aa13.08□□□□□ -0.32
KNSTRN-208ENST00000559604 CMTM2Q8TAZ6 248 aa13.08□□□□□ -0.32
KNSTRN-208ENST00000559604 KRTAP4-5Q9BYR2 181 aa13.08□□□□□ -0.32
KNSTRN-208ENST00000559604 A0A1W2PPV4 95 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 SIVA1O15304 175 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 HMGB3O15347 200 aaKnown RBP13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 NXPH4O95158 308 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 TDRG1Q3Y452 100 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 FAM74A1Q5RGS3 127 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 GOLT1AQ6ZVE7 132 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 OR10G4Q8NGN3 311 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 OR10G9Q8NGN4 311 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 OR10G7Q8NGN6 311 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 RASL10AQ92737 203 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 TVP23CQ96ET8 276 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 ZNF479Q96JC4 524 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 SPXQ9BT56 116 aa13.07□□□□□ -0.32
KNSTRN-208ENST00000559604 TRGV11A0A075B6L2 103 aa13.06□□□□□ -0.32
KNSTRN-208ENST00000559604 CDK2AP2O75956 126 aa13.06□□□□□ -0.32
KNSTRN-208ENST00000559604 SFTA3P0C7M3 94 aa13.06□□□□□ -0.32
KNSTRN-208ENST00000559604 LINC00315P59091 139 aa13.06□□□□□ -0.32
KNSTRN-208ENST00000559604 LYPD5Q6UWN5 251 aa13.06□□□□□ -0.32
KNSTRN-208ENST00000559604 ARL6IP6Q8N6S5 226 aa13.06□□□□□ -0.32
KNSTRN-208ENST00000559604 TRAV8-1A0A0A6YYK1 113 aa13.05□□□□□ -0.32
KNSTRN-208ENST00000559604 TRGV4A0A0C4DH28 118 aa13.05□□□□□ -0.32
KNSTRN-208ENST00000559604 GNG5P63218 68 aa13.05□□□□□ -0.32
KNSTRN-208ENST00000559604 MRPL23Q16540 153 aaKnown RBP13.05□□□□□ -0.32
KNSTRN-208ENST00000559604 Q6ZRN7 208 aaPredicted RBP13.05□□□□□ -0.32
KNSTRN-208ENST00000559604 IQCF2Q8IXL9 164 aa13.05□□□□□ -0.32
KNSTRN-208ENST00000559604 NAGKQ9UJ70 344 aa13.05□□□□□ -0.32
KNSTRN-208ENST00000559604 GNRH2O43555 120 aa13.04□□□□□ -0.32
KNSTRN-208ENST00000559604 ARL14EPLP0DKL9 152 aa13.04□□□□□ -0.32
KNSTRN-208ENST00000559604 KRTAP10-2P60368 255 aa13.04□□□□□ -0.32
KNSTRN-208ENST00000559604 HSD17B11Q8NBQ5 300 aa13.04□□□□□ -0.32
KNSTRN-208ENST00000559604 OR2G3Q8NGZ4 309 aa13.04□□□□□ -0.32
KNSTRN-208ENST00000559604 TRAV21A0A0B4J279 112 aa13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 F6UZH7 168 aa13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 STAG3L2P0CL84 134 aa13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 STAG3L3P0CL85 134 aa13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 CDC34P49427 236 aaPredicted RBP13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 NEGR1Q7Z3B1 354 aa13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 TREM1Q9NP99 234 aa13.03□□□□□ -0.32
KNSTRN-208ENST00000559604 K7EQD1 137 aa13.02□□□□□ -0.33
KNSTRN-208ENST00000559604 TYMSP04818 313 aa13.02□□□□□ -0.33
KNSTRN-208ENST00000559604 SGK494Q96LW2 274 aa13.02□□□□□ -0.33
KNSTRN-208ENST00000559604 AQP10Q96PS8 301 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms