RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 C5orf58C9J3I9 102 aa-0.47□□□□□ -2.48
CASC4-210ENST00000559550 FABP2P12104 132 aa-0.47□□□□□ -2.48
CASC4-210ENST00000559550 C3orf62Q6ZUJ4 267 aa-0.47□□□□□ -2.48
CASC4-210ENST00000559550 FKBP11Q9NYL4 201 aa-0.47□□□□□ -2.48
CASC4-210ENST00000559550 TRAPPC8Q9Y2L5 1435 aa-0.47□□□□□ -2.49
CASC4-210ENST00000559550 HERC1Q15751 4861 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 A0A096LNT2 108 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 HIGD1CA8MV81 97 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 IGF2P01344 180 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 S100A6P06703 90 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 CROCCP2Q86T23 111 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 OR5H6Q8NGV6 325 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 MYO7AQ13402 2215 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 KIAA1549LQ6ZVL6 1849 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 FAT1Q14517 4588 aa-0.48□□□□□ -2.49
CASC4-210ENST00000559550 SRRM2Q9UQ35 2752 aaKnown RBP-0.49□□□□□ -2.49
CASC4-210ENST00000559550 USP54Q70EL1 1684 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 ANK1P16157 1881 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 ARL5CA6NH57 179 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 H7BYZ3 331 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 TPT1P13693 172 aaKnown RBP-0.49□□□□□ -2.49
CASC4-210ENST00000559550 RPL19P84098 196 aaKnown RBP-0.49□□□□□ -2.49
CASC4-210ENST00000559550 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.49□□□□□ -2.49
CASC4-210ENST00000559550 PRELID3AQ96N28 172 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 MED11Q9P086 117 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 NUBP2Q9Y5Y2 271 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 HERC2O95714 4834 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 TECPR2O15040 1411 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 PCLOQ9Y6V0 5065 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 AHCTF1Q8WYP5 2266 aa-0.49□□□□□ -2.49
CASC4-210ENST00000559550 TRPM7Q96QT4 1865 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 TRDV1A0A1B0GX56 115 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 GABARAPH6UMI1 98 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 IGKCP01834 107 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 SAA1P0DJI8 122 aaPredicted RBP-0.5□□□□□ -2.49
CASC4-210ENST00000559550 TAS2R41P59536 307 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 MAXP61244 160 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 KLKP1Q107X0 134 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 MNS1Q8NEH6 495 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 ISOC1Q96CN7 298 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 CHMP6Q96FZ7 201 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 TMEM14BQ9NUH8 114 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 UFC1Q9Y3C8 167 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 ADGBQ8N7X0 1667 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 MYH2Q9UKX2 1941 aa-0.5□□□□□ -2.49
CASC4-210ENST00000559550 TMEM30CPA0ZSE6 113 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 DNAJB13P59910 316 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 RYR3Q15413 4870 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 LYPD5Q6UWN5 251 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 TANC1Q9C0D5 1861 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 LAMTOR3Q9UHA4 124 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 MPC1Q9Y5U8 109 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 U3KQA8 63 aa-0.51□□□□□ -2.49
CASC4-210ENST00000559550 NEBP20929 6669 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 ATG2AQ2TAZ0 1938 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 DLC1Q96QB1 1528 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 CHD9Q3L8U1 2897 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 CPDO75976 1380 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 CDC42EP2O14613 210 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 TPST1O60507 370 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 MPC1LP0DKB6 136 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 BCL2P10415 239 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 IL7P13232 177 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 KRTAP20-2Q3LI61 65 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 FAM24BQ8N5W8 94 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 BIN3Q9NQY0 253 aa-0.52□□□□□ -2.49
CASC4-210ENST00000559550 SPAG17Q6Q759 2223 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 TCOF1Q13428 1488 aaKnown RBP-0.53□□□□□ -2.49
CASC4-210ENST00000559550 NINQ8N4C6 2090 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 SDC2P34741 201 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 IQCJQ1A5X6 159 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 CCSMST1Q4G0I0 132 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 TEX29Q8N6K0 151 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 OR8J3Q8NGG0 315 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 DYDC1Q8WWB3 177 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 C19orf12Q9NSK7 152 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 AFDNP55196 1824 aaKnown RBP-0.53□□□□□ -2.49
CASC4-210ENST00000559550 FAM208BQ5VWN6 2430 aa-0.53□□□□□ -2.49
CASC4-210ENST00000559550 TRBV27A0A0K0K1C4 114 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 LOC107986453A0A1B0GWG9 222 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 TMEM189A5PLL7 270 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 EDF1O60869 148 aaKnown RBP-0.54□□□□□ -2.5
CASC4-210ENST00000559550 E2F6O75461 281 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 SLC25A4P12235 298 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 S100A11P31949 105 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 GTF2A1P52655 376 aaPredicted RBP-0.54□□□□□ -2.5
CASC4-210ENST00000559550 KRTAP19-7Q3SYF9 63 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 TMED4Q7Z7H5 227 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 STX19Q8N4C7 294 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 AP3S1Q92572 193 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 DMAC1Q96GE9 116 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 TANC2Q9HCD6 1990 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 CADP27708 2225 aa-0.54□□□□□ -2.5
CASC4-210ENST00000559550 A0A0G2JMM0 328 aa-0.55□□□□□ -2.5
CASC4-210ENST00000559550 TCTAP57738 103 aa-0.55□□□□□ -2.5
CASC4-210ENST00000559550 BASP1P80723 227 aaKnown RBP-0.55□□□□□ -2.5
CASC4-210ENST00000559550 Q5XG85 94 aa-0.55□□□□□ -2.5
CASC4-210ENST00000559550 LINC00305Q7Z4B0 112 aa-0.55□□□□□ -2.5
CASC4-210ENST00000559550 MORN4Q8NDC4 146 aa-0.55□□□□□ -2.5
CASC4-210ENST00000559550 HOPXQ9BPY8 73 aaPredicted RBP-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms