RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ZNF738Q8NE65 137 aa12.33□□□□□ -0.44
TPM1-219ENST00000559397 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
TPM1-219ENST00000559397 DAZAP1Q96EP5 407 aaKnown RBP12.33□□□□□ -0.44
TPM1-219ENST00000559397 SPAG8Q99932 426 aaPredicted RBP12.33□□□□□ -0.44
TPM1-219ENST00000559397 PHOX2AO14813 284 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 ZNF138P52744 262 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 TRAV2A0A0B4J234 112 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 K7EQG2 157 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 CT45A10P0DMU9 189 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 ID1P41134 155 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 TFPI2P48307 235 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 PAFAH1B2P68402 229 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 NDFIP1Q9BT67 221 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
TPM1-219ENST00000559397 SORL1Q92673 2214 aa12.31□□□□□ -0.44
TPM1-219ENST00000559397 A8MWL6 223 aa12.31□□□□□ -0.44
TPM1-219ENST00000559397 TRGC2P03986 189 aa12.31□□□□□ -0.44
TPM1-219ENST00000559397 KRTAP10-11P60412 298 aa12.31□□□□□ -0.44
TPM1-219ENST00000559397 BEAN1Q3B7T3 259 aa12.31□□□□□ -0.44
TPM1-219ENST00000559397 TMEM78Q5T7P6 136 aa12.31□□□□□ -0.44
TPM1-219ENST00000559397 WFDC3Q8IUB2 231 aa12.31□□□□□ -0.44
TPM1-219ENST00000559397 FAM231BA6NCW3 169 aa12.3□□□□□ -0.44
TPM1-219ENST00000559397 TCL1AP56279 114 aa12.3□□□□□ -0.44
TPM1-219ENST00000559397 SMUG1Q53HV7 270 aa12.3□□□□□ -0.44
TPM1-219ENST00000559397 ZFP82Q8N141 532 aa12.3□□□□□ -0.44
TPM1-219ENST00000559397 LINC00477Q96M19 166 aa12.3□□□□□ -0.44
TPM1-219ENST00000559397 GFRA4Q9GZZ7 299 aa12.3□□□□□ -0.44
TPM1-219ENST00000559397 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
TPM1-219ENST00000559397 OR4C46A6NHA9 309 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 ZNF80P51504 273 aaPredicted RBP12.29□□□□□ -0.44
TPM1-219ENST00000559397 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 OR8A1Q8NGG7 326 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 NEU1Q99519 415 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 NAT8BQ9UHF3 227 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 LOC105371267A0A1B0GV96 52 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 SH2D1AO60880 128 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
TPM1-219ENST00000559397 NUP35Q8NFH5 326 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 OR2D3Q8NGH3 330 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 OR10J6PQ8NGY7 276 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 GTSF1Q8WW33 167 aa12.29□□□□□ -0.44
TPM1-219ENST00000559397 FOXA3P55318 350 aaPredicted RBP12.28□□□□□ -0.44
TPM1-219ENST00000559397 RPL19P84098 196 aaKnown RBP12.28□□□□□ -0.44
TPM1-219ENST00000559397 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
TPM1-219ENST00000559397 HIGD1CA8MV81 97 aa12.27□□□□□ -0.45
TPM1-219ENST00000559397 ZNF705DP0CH99 300 aaPredicted RBP12.27□□□□□ -0.45
TPM1-219ENST00000559397 ZNF705BP0CI00 300 aaPredicted RBP12.27□□□□□ -0.45
TPM1-219ENST00000559397 DEFB1P60022 68 aa12.27□□□□□ -0.45
TPM1-219ENST00000559397 FAM19A4Q96LR4 140 aa12.27□□□□□ -0.45
TPM1-219ENST00000559397 ZMAT5Q9UDW3 170 aaKnown RBP12.27□□□□□ -0.45
TPM1-219ENST00000559397 NBEAL1Q6ZS30 2694 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 TRBV7-9A0A0J9YWB2 115 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 CD7P09564 240 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 COX19Q49B96 90 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 FRZBQ92765 325 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 FABP5P3A8MUU1 101 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 F6UB75 175 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 SNRPD3P62318 126 aaKnown RBP12.26□□□□□ -0.45
TPM1-219ENST00000559397 ODF3L2Q3SX64 289 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 RASL11AQ6T310 242 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 C19orf73Q9NVV2 129 aa12.26□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BKO60814 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BJP06899 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 ZNF688P0C7X2 276 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BOP23527 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BBP33778 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BDP58876 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BCP62807 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H1AQ02539 215 aaPredicted RBP12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST2H2BEQ16778 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.25□□□□□ -0.45
TPM1-219ENST00000559397 ATP5L2Q7Z4Y8 100 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 ZFAND2AQ8N6M9 145 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BHQ93079 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BNQ99877 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 HIST1H2BMQ99879 126 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 GNB1LQ9BYB4 327 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
TPM1-219ENST00000559397 TMEM189A5PLL7 270 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 SPINK4O60575 86 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 TRGC1P0CF51 173 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 GZMBP10144 247 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 ZNF575Q86XF7 245 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 APRG1Q8IVJ8 170 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 Q8N1Y9 231 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 FAM110AQ9BQ89 295 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 SAV1Q9H4B6 383 aaPredicted RBP12.24□□□□□ -0.45
TPM1-219ENST00000559397 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 NOTCH1P46531 2555 aa12.24□□□□□ -0.45
TPM1-219ENST00000559397 A0A1B0GXF2 115 aa12.23□□□□□ -0.45
TPM1-219ENST00000559397 CRISP2P16562 243 aa12.23□□□□□ -0.45
TPM1-219ENST00000559397 RPS20P60866 119 aaKnown RBP12.23□□□□□ -0.45
TPM1-219ENST00000559397 FABP9Q0Z7S8 132 aa12.23□□□□□ -0.45
TPM1-219ENST00000559397 PSMG4Q5JS54 123 aa12.23□□□□□ -0.45
TPM1-219ENST00000559397 MRPL54Q6P161 138 aaKnown RBP12.23□□□□□ -0.45
TPM1-219ENST00000559397 WDR73Q6P4I2 378 aa12.23□□□□□ -0.45
TPM1-219ENST00000559397 TMEM136Q6ZRR5 245 aa12.23□□□□□ -0.45
TPM1-219ENST00000559397 CMC4P56277 68 aaPredicted RBP12.22□□□□□ -0.45
TPM1-219ENST00000559397 DEFB131AP59861 70 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms