RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 STAG3L3P0CL85 134 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 DAZ2Q13117 558 aaKnown RBP7.68□□□□□ -1.18
SPG11-216ENST00000559347 Q6ZQT7 251 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 INO80EQ8NBZ0 244 aaPredicted RBP7.68□□□□□ -1.18
SPG11-216ENST00000559347 PKD1P98161 4303 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 TCL1AP56279 114 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 SERF2P84101 59 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 RNF212Q495C1 297 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 FAM74A1Q5RGS3 127 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 IBA57Q5T440 356 aaKnown RBP7.67□□□□□ -1.18
SPG11-216ENST00000559347 RPL7L1Q6DKI1 246 aaKnown RBP7.67□□□□□ -1.18
SPG11-216ENST00000559347 Q6ZTI0 123 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 RXFP4Q8TDU9 374 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 TMED6Q8WW62 240 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 RAB24Q969Q5 203 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 HYLS1Q96M11 299 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 GSN-AS1Q9NRJ2 163 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 RPH3ALQ9UNE2 315 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 LENEPQ9Y5L5 61 aa7.67□□□□□ -1.18
SPG11-216ENST00000559347 IGHV1OR15-1A0A075B7D0 117 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 PGPA6NDG6 321 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 RGS13O14921 159 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 MBP02144 154 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 HOXA5P20719 270 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 GNG5P63218 68 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 Q6AWC8 147 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 SSX7Q7RTT5 188 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 CMTM2Q8TAZ6 248 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 SUN5Q8TC36 379 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 TMPRSS5Q9H3S3 457 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 TP53TG3Q9ULZ0 132 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 MUC4Q99102 2169 aa7.66□□□□□ -1.18
SPG11-216ENST00000559347 TRAV8-1A0A0A6YYK1 113 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 BORCS7-ASMTA0A0B4J1R7 106 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 NUDT3O95989 172 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
SPG11-216ENST00000559347 GCHFRP30047 84 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 GOLT1AQ6ZVE7 132 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 ARL6IP6Q8N6S5 226 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 GNPNAT1Q96EK6 184 aaPredicted RBP7.65□□□□□ -1.18
SPG11-216ENST00000559347 ST6GAL2Q96JF0 529 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 C18orf15Q96N68 181 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 ARPC5LQ9BPX5 153 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 KLF12Q9Y4X4 402 aa7.65□□□□□ -1.18
SPG11-216ENST00000559347 IGLV2-18A0A075B6J9 118 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 TRAV26-1A0A087WT03 109 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 TRGV1A0A0A0MS02 117 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 GGTLC3B5MD39 225 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 M0R2N4 97 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 ARPC5O15511 151 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 SPINK4O60575 86 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 FAM3BP58499 235 aaPredicted RBP7.64□□□□□ -1.19
SPG11-216ENST00000559347 ZNF415Q09FC8 603 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 OR5I1Q13606 314 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 ZNF726P1Q15940 193 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 LGALS9BQ3B8N2 356 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 MUC21Q5SSG8 566 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 Q6ZR54 194 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 C5orf17Q8NAS9 161 aa7.64□□□□□ -1.19
SPG11-216ENST00000559347 ACTR3CQ9C0K3 210 aaPredicted RBP7.64□□□□□ -1.19
SPG11-216ENST00000559347 TRGV2A0A075B6R0 118 aa7.63□□□□□ -1.19
SPG11-216ENST00000559347 F6UZH7 168 aa7.63□□□□□ -1.19
SPG11-216ENST00000559347 SMLR1H3BR10 107 aa7.63□□□□□ -1.19
SPG11-216ENST00000559347 CXorf1O96002 111 aa7.63□□□□□ -1.19
SPG11-216ENST00000559347 TVP23CQ96ET8 276 aa7.63□□□□□ -1.19
SPG11-216ENST00000559347 ATG101Q9BSB4 218 aa7.63□□□□□ -1.19
SPG11-216ENST00000559347 TMEM167BQ9NRX6 74 aa7.63□□□□□ -1.19
SPG11-216ENST00000559347 MRPL16Q9NX20 251 aaKnown RBP7.63□□□□□ -1.19
SPG11-216ENST00000559347 A0A0J9YY99 117 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 CTXND1A0A1B0GTU2 59 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 SERTM2A0A1B0GWG4 89 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 H3BNG1 76 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 TAAR5O14804 337 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 RTL8CO15255 209 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 TCRAP04437 139 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 TDRG1Q3Y452 100 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 FAM159AQ6UWV7 190 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 LINC00336Q6ZUF6 198 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 CYTL1Q9NRR1 136 aa7.62□□□□□ -1.19
SPG11-216ENST00000559347 TRGV11A0A075B6L2 103 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 CCL18P55774 89 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 ZNF345Q14585 488 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 TMEM183BQ1AE95 376 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 IQCF2Q8IXL9 164 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 TMEM183AQ8IXX5 376 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 ZNRF2Q8NHG8 242 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 VSIG2Q96IQ7 327 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 SGK494Q96LW2 274 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 TREM1Q9NP99 234 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 MDFICQ9P1T7 246 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 NAGKQ9UJ70 344 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
SPG11-216ENST00000559347 TRAV21A0A0B4J279 112 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 A0A1W2PRE2 83 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 K7EQM0 130 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 IGLV2-11P01706 119 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 SUMO1P63165 101 aaKnown RBP7.6□□□□□ -1.19
SPG11-216ENST00000559347 AKR1C8PQ5T2L2 129 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 KCNRGQ8N5I3 272 aa7.6□□□□□ -1.19
SPG11-216ENST00000559347 CYB561D1Q8N8Q1 229 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms