RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.29
CASC4-209ENST00000559222 A0A1W2PRE2 83 aa13.27□□□□□ -0.29
CASC4-209ENST00000559222 NMBP08949 121 aa13.27□□□□□ -0.29
CASC4-209ENST00000559222 ARL6IP6Q8N6S5 226 aa13.27□□□□□ -0.29
CASC4-209ENST00000559222 LINC00479Q96M42 142 aa13.27□□□□□ -0.29
CASC4-209ENST00000559222 PYGO2Q9BRQ0 406 aa13.27□□□□□ -0.29
CASC4-209ENST00000559222 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.29
CASC4-209ENST00000559222 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.29
CASC4-209ENST00000559222 IGLL5B9A064 214 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 UMAD1C9J7I0 102 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 DEFB130BP0DP73 79 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 DEFB130AP0DP74 79 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 HTN3P15516 51 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 ATP5G3P48201 142 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 DAD1P61803 113 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 MUC21Q5SSG8 566 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 C11orf72Q8NBR9 251 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 C2CD4CQ8TF44 421 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 SFT2D1Q8WV19 159 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 MBD3L1Q8WWY6 194 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 C8orf49Q96NF6 230 aa13.26□□□□□ -0.29
CASC4-209ENST00000559222 TRAV34A0A0B4J273 112 aa13.25□□□□□ -0.29
CASC4-209ENST00000559222 TRBV7-9A0A0J9YWB2 115 aa13.25□□□□□ -0.29
CASC4-209ENST00000559222 LYRM9A8MSI8 78 aa13.25□□□□□ -0.29
CASC4-209ENST00000559222 EIF5AP63241 154 aaKnown RBP13.25□□□□□ -0.29
CASC4-209ENST00000559222 ZFP69Q49AA0 526 aa13.25□□□□□ -0.29
CASC4-209ENST00000559222 APLNQ9ULZ1 77 aa13.25□□□□□ -0.29
CASC4-209ENST00000559222 LENEPQ9Y5L5 61 aa13.25□□□□□ -0.29
CASC4-209ENST00000559222 Q6AWC8 147 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 ZNF493Q6ZR52 646 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 EIF4E3Q8N5X7 224 aaKnown RBP13.24□□□□□ -0.29
CASC4-209ENST00000559222 CYB561D1Q8N8Q1 229 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 LINC00476Q8WZB0 136 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 LINC00467Q9BRT7 94 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 GSN-AS1Q9NRJ2 163 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 PSG8Q9UQ74 426 aa13.24□□□□□ -0.29
CASC4-209ENST00000559222 TIMM8BQ9Y5J9 83 aaPredicted RBP13.24□□□□□ -0.29
CASC4-209ENST00000559222 VPS13DQ5THJ4 4388 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 IGHV4-4A0A075B6R2 117 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 IGHV1OR15-1A0A075B7D0 117 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 TEX48A0A1B0GUV7 120 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 CBY3A6NI87 242 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 PEX7O00628 323 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 RGS13O14921 159 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 IFNA7P01567 189 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 ZNF80P51504 273 aaPredicted RBP13.23□□□□□ -0.29
CASC4-209ENST00000559222 CCL20P78556 96 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 PRNTQ86SH4 94 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 SLC51BQ86UW2 128 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 CCDC28AQ8IWP9 274 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 TREM1Q9NP99 234 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 BOLA1Q9Y3E2 137 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 KLF12Q9Y4X4 402 aa13.23□□□□□ -0.29
CASC4-209ENST00000559222 PAGE4O60829 102 aa13.22□□□□□ -0.29
CASC4-209ENST00000559222 H2AFB1P0C5Y9 115 aa13.22□□□□□ -0.29
CASC4-209ENST00000559222 FLI1Q01543 452 aaPredicted RBP13.22□□□□□ -0.29
CASC4-209ENST00000559222 DPPA3Q6W0C5 159 aa13.22□□□□□ -0.29
CASC4-209ENST00000559222 TMEM75Q8N9X5 138 aa13.22□□□□□ -0.29
CASC4-209ENST00000559222 SERTM2A0A1B0GWG4 89 aa13.21□□□□□ -0.29
CASC4-209ENST00000559222 SULT1A2P50226 295 aa13.21□□□□□ -0.29
CASC4-209ENST00000559222 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.29
CASC4-209ENST00000559222 Q6ZTI0 123 aa13.21□□□□□ -0.29
CASC4-209ENST00000559222 LINC00612Q8N6U2 182 aa13.21□□□□□ -0.29
CASC4-209ENST00000559222 C11orf21Q9P2W6 132 aa13.21□□□□□ -0.29
CASC4-209ENST00000559222 NAGKQ9UJ70 344 aa13.21□□□□□ -0.29
CASC4-209ENST00000559222 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
CASC4-209ENST00000559222 GAGE7O76087 117 aa13.2□□□□□ -0.3
CASC4-209ENST00000559222 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
CASC4-209ENST00000559222 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
CASC4-209ENST00000559222 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
CASC4-209ENST00000559222 CST9LP1Q5W188 147 aa13.2□□□□□ -0.3
CASC4-209ENST00000559222 Q86TA4 180 aa13.2□□□□□ -0.3
CASC4-209ENST00000559222 SNURFLB1AK76 121 aa13.19□□□□□ -0.3
CASC4-209ENST00000559222 LY6G6CO95867 125 aa13.19□□□□□ -0.3
CASC4-209ENST00000559222 MDFICQ9P1T7 246 aa13.19□□□□□ -0.3
CASC4-209ENST00000559222 ARL2-SNX15V9GYD0 113 aa13.19□□□□□ -0.3
CASC4-209ENST00000559222 K7EQM0 130 aa13.18□□□□□ -0.3
CASC4-209ENST00000559222 TCL1AP56279 114 aa13.18□□□□□ -0.3
CASC4-209ENST00000559222 DAZ2Q13117 558 aaKnown RBP13.18□□□□□ -0.3
CASC4-209ENST00000559222 TMEM183BQ1AE95 376 aa13.18□□□□□ -0.3
CASC4-209ENST00000559222 TMEM88Q6PEY1 159 aa13.18□□□□□ -0.3
CASC4-209ENST00000559222 TMEM183AQ8IXX5 376 aa13.18□□□□□ -0.3
CASC4-209ENST00000559222 ZNF680Q8NEM1 530 aa13.18□□□□□ -0.3
CASC4-209ENST00000559222 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
CASC4-209ENST00000559222 SCO2A0A1W2PP80 73 aa13.17□□□□□ -0.3
CASC4-209ENST00000559222 GNRH2O43555 120 aa13.17□□□□□ -0.3
CASC4-209ENST00000559222 GCGP01275 180 aa13.17□□□□□ -0.3
CASC4-209ENST00000559222 NDFIP1Q9BT67 221 aa13.17□□□□□ -0.3
CASC4-209ENST00000559222 TRAV21A0A0B4J279 112 aa13.16□□□□□ -0.3
CASC4-209ENST00000559222 RAB5CP51148 216 aa13.16□□□□□ -0.3
CASC4-209ENST00000559222 IBA57Q5T440 356 aaKnown RBP13.16□□□□□ -0.3
CASC4-209ENST00000559222 EIF5AL1Q6IS14 154 aaKnown RBP13.16□□□□□ -0.3
CASC4-209ENST00000559222 ALKAL2Q6UX46 152 aa13.16□□□□□ -0.3
CASC4-209ENST00000559222 HIST1H2BAQ96A08 127 aa13.16□□□□□ -0.3
CASC4-209ENST00000559222 NKX6-2Q9C056 277 aaPredicted RBP13.16□□□□□ -0.3
CASC4-209ENST00000559222 GNG13Q9P2W3 67 aa13.16□□□□□ -0.3
CASC4-209ENST00000559222 TRGV1A0A0A0MS02 117 aa13.15□□□□□ -0.3
CASC4-209ENST00000559222 F5H768 121 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms