RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 GATA1P15976 413 aaPredicted RBP6.96□□□□□ -1.3
SPG11-214ENST00000558989 LCN15Q6UWW0 184 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 LINC00336Q6ZUF6 198 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 MIR17HGQ75NE6 70 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 SSX7Q7RTT5 188 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 OR8A1Q8NGG7 326 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 C11orf68Q9H3H3 251 aaKnown RBP6.96□□□□□ -1.3
SPG11-214ENST00000558989 WFDC1Q9HC57 220 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 ZNF331Q9NQX6 463 aaPredicted RBP6.96□□□□□ -1.3
SPG11-214ENST00000558989 ZNF586Q9NXT0 402 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 HYDINQ4G0P3 5121 aa6.96□□□□□ -1.3
SPG11-214ENST00000558989 SACSQ9NZJ4 4579 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 GAGE12BA1L429 117 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 GAGE12HA6NDE8 117 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 MPDU1O75352 247 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 DUSP14O95147 198 aaKnown RBP6.95□□□□□ -1.3
SPG11-214ENST00000558989 HTN1P15515 57 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 GUK1Q16774 197 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 Q5BKY6 102 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 CEMP1Q6PRD7 247 aaPredicted RBP6.95□□□□□ -1.3
SPG11-214ENST00000558989 SCGB1C1Q8TD33 95 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 LYSTQ99698 3801 aa6.95□□□□□ -1.3
SPG11-214ENST00000558989 NUPR2A6NF83 97 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 C17orf112F2Z3M2 114 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 M0R036 132 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 JTBO76095 146 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 OR10J4P0C629 311 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 IGLC2P0DOY2 106 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 FFAR4Q5NUL3 377 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 AMTNQ6UX39 209 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 LINC00518Q8N0U6 118 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 C1orf158Q8N1D5 194 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 SLC50A1Q9BRV3 221 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 SLC25A2Q9BXI2 301 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 GOLT1BQ9Y3E0 138 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 ZNF705GA8MUZ8 300 aaPredicted RBP6.94□□□□□ -1.3
SPG11-214ENST00000558989 M0R3E3 92 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 LY6G6CO95867 125 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 Q6ZTC4 211 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 EXOC3-AS1Q8N2X6 119 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 NIPSNAP3BQ9BS92 247 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 TIMM9Q9Y5J7 89 aa6.94□□□□□ -1.3
SPG11-214ENST00000558989 ZNF705AQ6ZN79 300 aaPredicted RBP6.93□□□□□ -1.3
SPG11-214ENST00000558989 SMIM15Q7Z3B0 74 aa6.93□□□□□ -1.3
SPG11-214ENST00000558989 PRR26Q8N8Z3 221 aa6.93□□□□□ -1.3
SPG11-214ENST00000558989 HSD17B11Q8NBQ5 300 aa6.93□□□□□ -1.3
SPG11-214ENST00000558989 BAALCQ8WXS3 180 aa6.93□□□□□ -1.3
SPG11-214ENST00000558989 KLK5Q9Y337 293 aaPredicted RBP6.93□□□□□ -1.3
SPG11-214ENST00000558989 FXYD6-FXYD2A0A087WZ82 144 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 IGLL5B9A064 214 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 HMGB3O15347 200 aaKnown RBP6.92□□□□□ -1.3
SPG11-214ENST00000558989 CRXO43186 299 aaPredicted RBP6.92□□□□□ -1.3
SPG11-214ENST00000558989 OR7C2O60412 319 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 INSP01308 110 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 HBE1P02100 147 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 CXCL2P19875 107 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 ERCC8Q13216 396 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 SOHLH1Q5JUK2 328 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 ZFP82Q8N141 532 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 RPP25LQ8N5L8 163 aaKnown RBP6.92□□□□□ -1.3
SPG11-214ENST00000558989 OR10J6PQ8NGY7 276 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 IGF2BP2-AS1Q96M15 143 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 KCNIP2Q9NS61 270 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 FUT9Q9Y231 359 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 TRBV19A0A075B6N1 114 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 HIST1H1EP10412 219 aaKnown RBP6.92□□□□□ -1.3
SPG11-214ENST00000558989 HTN3P15516 51 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 SEC61BP60468 96 aaKnown RBP6.92□□□□□ -1.3
SPG11-214ENST00000558989 ICAM4Q14773 271 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 RRN3P1Q2M238 152 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 C12orf74Q32Q52 190 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 FAM167A-AS1Q96KT0 104 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 LINC01587Q99440 93 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 PAXXQ9BUH6 204 aa6.92□□□□□ -1.3
SPG11-214ENST00000558989 ACTR3CQ9C0K3 210 aaPredicted RBP6.92□□□□□ -1.3
SPG11-214ENST00000558989 PPP1R2P9O14990 202 aa6.91□□□□□ -1.3
SPG11-214ENST00000558989 ATP5LO75964 103 aa6.91□□□□□ -1.3
SPG11-214ENST00000558989 RAB2AP61019 212 aa6.91□□□□□ -1.3
SPG11-214ENST00000558989 FAM222AQ5U5X8 452 aa6.91□□□□□ -1.3
SPG11-214ENST00000558989 OR2D3Q8NGH3 330 aa6.91□□□□□ -1.3
SPG11-214ENST00000558989 OR2T35Q8NGX2 323 aa6.91□□□□□ -1.3
SPG11-214ENST00000558989 TMEM14CQ9P0S9 112 aa6.91□□□□□ -1.3
SPG11-214ENST00000558989 YTHDF2Q9Y5A9 579 aaKnown RBP6.91□□□□□ -1.3
SPG11-214ENST00000558989 ALMS1Q8TCU4 4167 aa6.9□□□□□ -1.3
SPG11-214ENST00000558989 IGKV2-40A0A087WW87 121 aaPredicted RBP6.9□□□□□ -1.3
SPG11-214ENST00000558989 A8MTW9 85 aa6.9□□□□□ -1.3
SPG11-214ENST00000558989 IGKV2D-40P01614 121 aaPredicted RBP6.9□□□□□ -1.3
SPG11-214ENST00000558989 GIPP09681 153 aaPredicted RBP6.9□□□□□ -1.3
SPG11-214ENST00000558989 NBEAP1P0C6P0 100 aa6.9□□□□□ -1.3
SPG11-214ENST00000558989 AZU1P20160 251 aa6.9□□□□□ -1.3
SPG11-214ENST00000558989 UBE2L3P68036 154 aaKnown RBP6.9□□□□□ -1.3
SPG11-214ENST00000558989 OXA1LQ15070 435 aa6.9□□□□□ -1.3
SPG11-214ENST00000558989 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.3
SPG11-214ENST00000558989 PHYHIPLQ96FC7 376 aa6.9□□□□□ -1.3
SPG11-214ENST00000558989 MRPL32Q9BYC8 188 aaKnown RBP6.9□□□□□ -1.3
SPG11-214ENST00000558989 NACAE9PAV3 2078 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 DEFB131BA0A096LNP1 70 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 SMIM9A6NGZ8 99 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 SPART-AS1P0CW21 52 aa6.9□□□□□ -1.31
SPG11-214ENST00000558989 CT45A10P0DMU9 189 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms