RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 GNPNAT1Q96EK6 184 aaPredicted RBP5.11□□□□□ -1.59
SPG11-213ENST00000558988 LYRM2Q9NU23 88 aaPredicted RBP5.11□□□□□ -1.59
SPG11-213ENST00000558988 LINC00588Q9Y4M8 146 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 DNAH1Q9P2D7 4330 aa5.11□□□□□ -1.59
SPG11-213ENST00000558988 TRBV19A0A075B6N1 114 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 TRGV2A0A075B6R0 118 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 IGKV2-40A0A087WW87 121 aaPredicted RBP5.1□□□□□ -1.59
SPG11-213ENST00000558988 TRGV1A0A0A0MS02 117 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 NBDYA0A0U1RRE5 68 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 IGKV2D-40P01614 121 aaPredicted RBP5.1□□□□□ -1.59
SPG11-213ENST00000558988 S100A11P31949 105 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 RPL29P47914 159 aaKnown RBP5.1□□□□□ -1.59
SPG11-213ENST00000558988 BTN1A1Q13410 526 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 GUK1Q16774 197 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 Q6ZTI0 123 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 ZNRF2Q8NHG8 242 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 SAT2Q96F10 170 aaPredicted RBP5.1□□□□□ -1.59
SPG11-213ENST00000558988 CCDC32Q9BV29 185 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 C11orf1Q9H5F2 150 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 AAMDCQ9H7C9 122 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 GSN-AS1Q9NRJ2 163 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 NDUFA13Q9P0J0 144 aa5.1□□□□□ -1.59
SPG11-213ENST00000558988 C7orf71A4D174 169 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 C16orf90A8MZG2 172 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 NDUFB4O95168 129 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 IGHV3-53P01767 116 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 GPX1P07203 203 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 OR10J4P0C629 311 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 M6PRP20645 277 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 CD300CQ08708 224 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 VWC2Q2TAL6 325 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 MIR17HGQ75NE6 70 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 C6orf223Q8N319 242 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 OR5C1Q8NGR4 320 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 Q8TAT8 98 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 C20orf144Q9BQM9 153 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 SLC25A2Q9BXI2 301 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 NPCDR1Q9BY65 106 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 AGPAT4-IT1Q9H0P7 198 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 MRPL16Q9NX20 251 aaKnown RBP5.09□□□□□ -1.59
SPG11-213ENST00000558988 OR5AC2Q9NZP5 309 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 RPH3ALQ9UNE2 315 aa5.09□□□□□ -1.59
SPG11-213ENST00000558988 GAGE10A6NGK3 116 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 OR7C2O60412 319 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 EIF3GO75821 320 aaKnown RBP eCLIP5.08□□□□□ -1.6
SPG11-213ENST00000558988 SLC25A5P05141 298 aaKnown RBP5.08□□□□□ -1.6
SPG11-213ENST00000558988 HIST1H1EP10412 219 aaKnown RBP5.08□□□□□ -1.6
SPG11-213ENST00000558988 FAM3BP58499 235 aaPredicted RBP5.08□□□□□ -1.6
SPG11-213ENST00000558988 ASAH1Q13510 395 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 ATP6V1FQ16864 119 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 TMEM78Q5T7P6 136 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 Q6ZQT7 251 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 NRACQ8N912 160 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 RXFP4Q8TDU9 374 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 VGLL1Q99990 258 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 PYGO2Q9BRQ0 406 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 SMIM3Q9BZL3 60 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 SLC25A31Q9H0C2 315 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 FUT9Q9Y231 359 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 KLF12Q9Y4X4 402 aa5.08□□□□□ -1.6
SPG11-213ENST00000558988 MUC4Q99102 2169 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 A0A096LPF7 62 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 E5RGE8 158 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 SSNA1O43805 119 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 ZNF253O75346 499 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 MPDU1O75352 247 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 NPSP0C0P6 89 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 PCP4P48539 62 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 IL15RAQ13261 267 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 ESRGQ1W209 222 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 FFAR4Q5NUL3 377 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 MUC21Q5SSG8 566 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 PRR9Q5T870 116 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 EIF4E3Q8N5X7 224 aaKnown RBP5.07□□□□□ -1.6
SPG11-213ENST00000558988 ZNF680Q8NEM1 530 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 S100ZQ8WXG8 99 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 MRPL53Q96EL3 112 aaKnown RBP5.07□□□□□ -1.6
SPG11-213ENST00000558988 PHYHIPLQ96FC7 376 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 ODF3Q96PU9 254 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 PAXXQ9BUH6 204 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 OR51M1Q9H341 326 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 Q9H8V8 135 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 TMEM14CQ9P0S9 112 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 TP53TG3Q9ULZ0 132 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 PRELID1Q9Y255 219 aa5.07□□□□□ -1.6
SPG11-213ENST00000558988 PLECQ15149 4684 aaKnown RBP5.06□□□□□ -1.6
SPG11-213ENST00000558988 C17orf112F2Z3M2 114 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 INMT-MINDY4F8WBC2 141 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 UPK1BO75841 260 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 NBEAP1P0C6P0 100 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 CSN1S1P47710 185 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 RANP62826 216 aaKnown RBP5.06□□□□□ -1.6
SPG11-213ENST00000558988 UBE2L3P68036 154 aaKnown RBP5.06□□□□□ -1.6
SPG11-213ENST00000558988 PDE6HQ13956 83 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 LINC00612Q8N6U2 182 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 C11orf72Q8NBR9 251 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 SCGB1C1Q8TD33 95 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 FAM167A-AS1Q96KT0 104 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 HYLS1Q96M11 299 aa5.06□□□□□ -1.6
SPG11-213ENST00000558988 LINC00477Q96M19 166 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms