RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 UPK3BQ9BT76 320 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 TRGV1A0A0A0MS02 117 aa11.79□□□□□ -0.52
LRRC28-210ENST00000558879 EIF3GO75821 320 aaKnown RBP eCLIP11.79□□□□□ -0.52
LRRC28-210ENST00000558879 RAB2AP61019 212 aa11.79□□□□□ -0.52
LRRC28-210ENST00000558879 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
LRRC28-210ENST00000558879 Q6AWC8 147 aa11.79□□□□□ -0.52
LRRC28-210ENST00000558879 VSIG2Q96IQ7 327 aa11.79□□□□□ -0.52
LRRC28-210ENST00000558879 TRGV2A0A075B6R0 118 aa11.78□□□□□ -0.52
LRRC28-210ENST00000558879 ARL6IP6Q8N6S5 226 aa11.78□□□□□ -0.52
LRRC28-210ENST00000558879 OR2G3Q8NGZ4 309 aa11.78□□□□□ -0.52
LRRC28-210ENST00000558879 AQP10Q96PS8 301 aa11.78□□□□□ -0.52
LRRC28-210ENST00000558879 OTORQ9NRC9 128 aa11.78□□□□□ -0.52
LRRC28-210ENST00000558879 ZNF415Q09FC8 603 aa11.77□□□□□ -0.53
LRRC28-210ENST00000558879 C6orf223Q8N319 242 aa11.77□□□□□ -0.53
LRRC28-210ENST00000558879 ST6GAL2Q96JF0 529 aa11.77□□□□□ -0.53
LRRC28-210ENST00000558879 ARPC5LQ9BPX5 153 aa11.77□□□□□ -0.53
LRRC28-210ENST00000558879 MRPS16Q9Y3D3 137 aaKnown RBP11.77□□□□□ -0.53
LRRC28-210ENST00000558879 DNAH11Q96DT5 4516 aa11.77□□□□□ -0.53
LRRC28-210ENST00000558879 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
LRRC28-210ENST00000558879 A0A096LPF7 62 aa11.76□□□□□ -0.53
LRRC28-210ENST00000558879 ESRGQ1W209 222 aa11.76□□□□□ -0.53
LRRC28-210ENST00000558879 PSMG3Q9BT73 122 aaPredicted RBP11.76□□□□□ -0.53
LRRC28-210ENST00000558879 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
LRRC28-210ENST00000558879 MRPL16Q9NX20 251 aaKnown RBP11.76□□□□□ -0.53
LRRC28-210ENST00000558879 A0A1W2PPV4 95 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 PGPA6NDG6 321 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 CDC34P49427 236 aaPredicted RBP11.75□□□□□ -0.53
LRRC28-210ENST00000558879 FAM74A1Q5RGS3 127 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 OR10G4Q8NGN3 311 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 OR10G9Q8NGN4 311 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 OR10G7Q8NGN6 311 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 MED28Q9H204 178 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 Q9H8V8 135 aa11.75□□□□□ -0.53
LRRC28-210ENST00000558879 STAG3L2P0CL84 134 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 STAG3L3P0CL85 134 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 ARL14EPLP0DKL9 152 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 MED14OSP0DP75 135 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 TNP2Q05952 138 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 TDRG1Q3Y452 100 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 MUC21Q5SSG8 566 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 HSD17B11Q8NBQ5 300 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 CMTM2Q8TAZ6 248 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 SUN5Q8TC36 379 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 ASB13Q8WXK3 278 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 HYLS1Q96M11 299 aa11.74□□□□□ -0.53
LRRC28-210ENST00000558879 HMGB3O15347 200 aaKnown RBP11.73□□□□□ -0.53
LRRC28-210ENST00000558879 GIPP09681 153 aaPredicted RBP11.73□□□□□ -0.53
LRRC28-210ENST00000558879 ATP6V0CP27449 155 aa11.73□□□□□ -0.53
LRRC28-210ENST00000558879 Q5BKY6 102 aa11.73□□□□□ -0.53
LRRC28-210ENST00000558879 TTC32Q5I0X7 151 aa11.73□□□□□ -0.53
LRRC28-210ENST00000558879 GOLT1AQ6ZVE7 132 aa11.73□□□□□ -0.53
LRRC28-210ENST00000558879 RPH3ALQ9UNE2 315 aa11.73□□□□□ -0.53
LRRC28-210ENST00000558879 TRGV11A0A075B6L2 103 aa11.72□□□□□ -0.53
LRRC28-210ENST00000558879 A0A1W2PPQ1 181 aa11.72□□□□□ -0.53
LRRC28-210ENST00000558879 RNF222A6NCQ9 220 aa11.72□□□□□ -0.53
LRRC28-210ENST00000558879 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
LRRC28-210ENST00000558879 KRTAP17-1Q9BYP8 105 aa11.72□□□□□ -0.53
LRRC28-210ENST00000558879 MDFICQ9P1T7 246 aa11.72□□□□□ -0.53
LRRC28-210ENST00000558879 TRAV8-1A0A0A6YYK1 113 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 CRYBA4P53673 196 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 GNG5P63218 68 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 SERF2P84101 59 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 FHL2Q14192 279 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 FAM159AQ6UWV7 190 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 ZNF575Q86XF7 245 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 RASL10AQ92737 203 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 PRO0255Q9UI72 69 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
LRRC28-210ENST00000558879 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
LRRC28-210ENST00000558879 IGHV3-53P01767 116 aa11.7□□□□□ -0.54
LRRC28-210ENST00000558879 SPXQ9BT56 116 aa11.7□□□□□ -0.54
LRRC28-210ENST00000558879 SH3BGRL3Q9H299 93 aa11.7□□□□□ -0.54
LRRC28-210ENST00000558879 F6UZH7 168 aa11.69□□□□□ -0.54
LRRC28-210ENST00000558879 PAX4O43316 350 aa11.69□□□□□ -0.54
LRRC28-210ENST00000558879 GCHFRP30047 84 aa11.69□□□□□ -0.54
LRRC28-210ENST00000558879 SLAQ13239 276 aa11.69□□□□□ -0.54
LRRC28-210ENST00000558879 IQCF2Q8IXL9 164 aa11.69□□□□□ -0.54
LRRC28-210ENST00000558879 C5orf17Q8NAS9 161 aa11.69□□□□□ -0.54
LRRC28-210ENST00000558879 TNFSF18Q9UNG2 199 aa11.69□□□□□ -0.54
LRRC28-210ENST00000558879 TRAV21A0A0B4J279 112 aa11.68□□□□□ -0.54
LRRC28-210ENST00000558879 G3V3Q6 166 aa11.68□□□□□ -0.54
LRRC28-210ENST00000558879 MBP02144 154 aa11.68□□□□□ -0.54
LRRC28-210ENST00000558879 BTF3P20290 206 aaKnown RBP11.68□□□□□ -0.54
LRRC28-210ENST00000558879 ZNF479Q96JC4 524 aa11.68□□□□□ -0.54
LRRC28-210ENST00000558879 TREM1Q9NP99 234 aa11.68□□□□□ -0.54
LRRC28-210ENST00000558879 PCLOQ9Y6V0 5065 aa11.68□□□□□ -0.54
LRRC28-210ENST00000558879 RYR1P21817 5038 aa11.68□□□□□ -0.54
LRRC28-210ENST00000558879 IGHV3-16A0A0C4DH30 117 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 GGTLC3B5MD39 225 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 TCRAP04437 139 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 TYMSP04818 313 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 SFTA3P0C7M3 94 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 C8orf49Q96NF6 230 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 NAGKQ9UJ70 344 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
LRRC28-210ENST00000558879 CXorf1O96002 111 aa11.66□□□□□ -0.54
LRRC28-210ENST00000558879 IGLV2-11P01706 119 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms