RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 PGPA6NDG6 321 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 RANP62826 216 aaKnown RBP11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 RNF212Q495C1 297 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 Q6ZTC4 211 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 BLNKQ8WV28 456 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 PKHD1P08F94 4074 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 MUC4Q99102 2169 aa11.6□□□□□ -0.55
CDC42BPB-203ENST00000558867 SERTM2A0A1B0GWG4 89 aa11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 A0A1W2PS18 150 aa11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 SLC25A5P05141 298 aaKnown RBP11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 GNG4P50150 75 aa11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 PSG9Q00887 426 aa11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 TMEM183BQ1AE95 376 aa11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 FMC1Q96HJ9 113 aa11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
CDC42BPB-203ENST00000558867 DEFB131BA0A096LNP1 70 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 AMBPP02760 352 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 TCRAP04437 139 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 RBMY1A1P0DJD3 496 aaKnown RBP11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 RBMY1CP0DJD4 496 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 RBMY1FQ15415 496 aaKnown RBP11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 CENPWQ5EE01 88 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 OR8I2Q8N0Y5 310 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 OCC1Q8TAD7 63 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 IMMP2LQ96T52 175 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 FAT2Q9NYQ8 4349 aa11.58□□□□□ -0.56
CDC42BPB-203ENST00000558867 FBLL1A6NHQ2 334 aaKnown RBP11.57□□□□□ -0.56
CDC42BPB-203ENST00000558867 H7BYZ3 331 aa11.57□□□□□ -0.56
CDC42BPB-203ENST00000558867 IGLV2-8P01709 118 aa11.57□□□□□ -0.56
CDC42BPB-203ENST00000558867 GALR1P47211 349 aa11.57□□□□□ -0.56
CDC42BPB-203ENST00000558867 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.57□□□□□ -0.56
CDC42BPB-203ENST00000558867 SFRP2Q96HF1 295 aa11.57□□□□□ -0.56
CDC42BPB-203ENST00000558867 DNAH17Q9UFH2 4485 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 GCGP01275 180 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 ELOBQ15370 118 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 LGALS9BQ3B8N2 356 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 C16orf54Q6UWD8 224 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 TRPT1Q86TN4 253 aaKnown RBP11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 GRAMD2BQ96HH9 432 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 SLC50A1Q9BRV3 221 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 CLEC5AQ9NY25 188 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 DNAH2Q9P225 4427 aa11.56□□□□□ -0.56
CDC42BPB-203ENST00000558867 TRBV24-1A0A075B6N3 115 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 K7EN84 100 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 M0R2N4 97 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 PFN1P07737 140 aaKnown RBP11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 UBE2G1P62253 170 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 FAM231DQ6ZW35 169 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 TMEM75Q8N9X5 138 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 GLMPQ8WWB7 406 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 BTF3L4Q96K17 158 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 C17orf77Q96MU5 243 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 PYGO2Q9BRQ0 406 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 MLST8Q9BVC4 326 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 C1QTNF4Q9BXJ3 329 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 ZNF331Q9NQX6 463 aaPredicted RBP11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 OSTCQ9NRP0 149 aa11.55□□□□□ -0.56
CDC42BPB-203ENST00000558867 IGHV3-66A0A0C4DH42 116 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 K7EQM0 130 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 SLC17A3O00476 420 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 ISLRO14498 428 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 RTL8CO15255 209 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 LTAP01374 205 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 NUTF2P61970 127 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 UBE2DNLQ8IWF7 75 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 MRPL53Q96EL3 112 aaKnown RBP11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 BIN3Q9NQY0 253 aa11.54□□□□□ -0.56
CDC42BPB-203ENST00000558867 TRAV9-1A0A075B6T8 112 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 PGPEP1LA6NFU8 196 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 APOHP02749 345 aaPredicted RBP11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 S100PP25815 95 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 GNG5P63218 68 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 BAGE2Q86Y30 109 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 EXOC3-AS1Q8N2X6 119 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 OR10G8Q8NGN5 311 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 X6R8D5 127 aa11.53□□□□□ -0.56
CDC42BPB-203ENST00000558867 DIRC3C9JPN6 131 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 H3BTX0 84 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 K7EQG2 157 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 IGLV2-11P01706 119 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 GIG44P09565 113 aaPredicted RBP11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 RAB5AP20339 215 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 CSN1S1P47710 185 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 C12orf74Q32Q52 190 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 ACTL10Q5JWF8 245 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 ZFP30Q9Y2G7 519 aa11.52□□□□□ -0.57
CDC42BPB-203ENST00000558867 DNAH11Q96DT5 4516 aa11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 SNRPCP09234 159 aaKnown RBP11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 COX8CQ7Z4L0 72 aa11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 Q86TA4 180 aa11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 FAM210BQ96KR6 192 aa11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 LINC00479Q96M42 142 aa11.51□□□□□ -0.57
CDC42BPB-203ENST00000558867 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms