RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 C20orf144Q9BQM9 153 aa10.97□□□□□ -0.65
VPS18-202ENST00000558474 OSTCQ9NRP0 149 aa10.97□□□□□ -0.65
VPS18-202ENST00000558474 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 FABP5P3A8MUU1 101 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 A8MZ25 164 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 G3V4G9 280 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 MT-ND4LP03901 98 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 PFN1P07737 140 aaKnown RBP10.96□□□□□ -0.65
VPS18-202ENST00000558474 PRB4P10163 310 aaPredicted RBP10.96□□□□□ -0.65
VPS18-202ENST00000558474 KRTAP10-11P60412 298 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 Q6AWC8 147 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 DEFB125Q8N687 156 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 C15orf54Q8N8G6 183 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 NHLRC2Q8NBF2 726 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 SFRP2Q96HF1 295 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 CTDSP1Q9GZU7 261 aa10.96□□□□□ -0.65
VPS18-202ENST00000558474 A0A087WWC5 75 aa10.95□□□□□ -0.66
VPS18-202ENST00000558474 TRAV21A0A0B4J279 112 aa10.95□□□□□ -0.66
VPS18-202ENST00000558474 ERVFC1-1P60608 527 aa10.95□□□□□ -0.66
VPS18-202ENST00000558474 IBA57Q5T440 356 aaKnown RBP10.95□□□□□ -0.66
VPS18-202ENST00000558474 C1QTNF4Q9BXJ3 329 aa10.95□□□□□ -0.66
VPS18-202ENST00000558474 TMEM242Q9NWH2 141 aa10.95□□□□□ -0.66
VPS18-202ENST00000558474 RBMY1BA6NDE4 496 aaKnown RBP10.94□□□□□ -0.66
VPS18-202ENST00000558474 RBMY1EA6NEQ0 496 aaKnown RBP10.94□□□□□ -0.66
VPS18-202ENST00000558474 IGKV3-20P01619 116 aa10.94□□□□□ -0.66
VPS18-202ENST00000558474 RBMY1DP0C7P1 496 aaKnown RBP10.94□□□□□ -0.66
VPS18-202ENST00000558474 CRIP1P50238 77 aa10.94□□□□□ -0.66
VPS18-202ENST00000558474 OR5I1Q13606 314 aa10.94□□□□□ -0.66
VPS18-202ENST00000558474 OR10G8Q8NGN5 311 aa10.94□□□□□ -0.66
VPS18-202ENST00000558474 SRD5A3Q9H8P0 318 aa10.94□□□□□ -0.66
VPS18-202ENST00000558474 AURKAIP1Q9NWT8 199 aaPredicted RBP10.94□□□□□ -0.66
VPS18-202ENST00000558474 KIR2DL5BA0A0G2JN68 375 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 KIR2DL5BA0A0G2JPC4 375 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 C7orf71A4D174 169 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 P01737 135 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 SPINK13Q1W4C9 94 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 CT83Q5H943 113 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 PRR27Q6MZM9 219 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 KIR2DL5AQ8N109 375 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 NUDT10Q8NFP7 164 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 KIR2DL5BQ8NHK3 375 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 NUDT11Q96G61 164 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 WFDC10AQ9H1F0 79 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 CMYA5Q8N3K9 4069 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 AGRNO00468 2067 aa10.93□□□□□ -0.66
VPS18-202ENST00000558474 LOC102724200A0A096LPH7 203 aaPredicted RBP10.92□□□□□ -0.66
VPS18-202ENST00000558474 C7orf77A4D0Y5 90 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 M0R2Z0 102 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 CRXO43186 299 aaPredicted RBP10.92□□□□□ -0.66
VPS18-202ENST00000558474 GATCO43716 136 aaKnown RBP10.92□□□□□ -0.66
VPS18-202ENST00000558474 SH2D1AO60880 128 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 RNASE4P34096 147 aaKnown RBP10.92□□□□□ -0.66
VPS18-202ENST00000558474 ZNF80P51504 273 aaPredicted RBP10.92□□□□□ -0.66
VPS18-202ENST00000558474 RNF212Q495C1 297 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 LINC01559Q495D7 138 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 PRR9Q5T870 116 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 GFI1BQ5VTD9 330 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 LINC00322Q6ZN03 302 aaPredicted RBP10.92□□□□□ -0.66
VPS18-202ENST00000558474 TMEM256Q8N2U0 113 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 TUBA4BQ9H853 241 aa10.92□□□□□ -0.66
VPS18-202ENST00000558474 XKRY2A2RUG3 117 aa10.91□□□□□ -0.66
VPS18-202ENST00000558474 ZNF324O75467 553 aaPredicted RBP10.91□□□□□ -0.66
VPS18-202ENST00000558474 INSP01308 110 aa10.91□□□□□ -0.66
VPS18-202ENST00000558474 CXCL1P09341 107 aa10.91□□□□□ -0.66
VPS18-202ENST00000558474 APOC4P55056 127 aa10.91□□□□□ -0.66
VPS18-202ENST00000558474 RPS20P60866 119 aaKnown RBP10.91□□□□□ -0.66
VPS18-202ENST00000558474 BTN1A1Q13410 526 aa10.91□□□□□ -0.66
VPS18-202ENST00000558474 CSTL1Q9H114 145 aa10.91□□□□□ -0.66
VPS18-202ENST00000558474 RNASE7Q9H1E1 156 aaKnown RBP10.91□□□□□ -0.66
VPS18-202ENST00000558474 RPP21Q9H633 154 aaKnown RBP10.91□□□□□ -0.66
VPS18-202ENST00000558474 RPS10P5Q9NQ39 176 aa10.91□□□□□ -0.66
VPS18-202ENST00000558474 FAM231BA6NCW3 169 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 CXorf65A6NEN9 183 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 ZNF705GA8MUZ8 300 aaPredicted RBP10.9□□□□□ -0.66
VPS18-202ENST00000558474 IGHV4-30-4P0DP06 118 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 TDRG1Q3Y452 100 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 KCNS1Q96KK3 526 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 IMMP2LQ96T52 175 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 LINC00467Q9BRT7 94 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 V9GYV3 84 aa10.9□□□□□ -0.66
VPS18-202ENST00000558474 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 PKD1L1Q8TDX9 2849 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 TRAV12-2A0A075B6T6 113 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 TMEM189A5PLL7 270 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 A8MWL6 223 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 H7BYZ3 331 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 UBE2CO00762 179 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 RPL35AP18077 110 aaKnown RBP10.89□□□□□ -0.67
VPS18-202ENST00000558474 GFRA4Q9GZZ7 299 aa10.89□□□□□ -0.67
VPS18-202ENST00000558474 TRAV12-3A0A0B4J271 114 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 J3KRW8 73 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 ORM1P02763 201 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 KIR3DS1Q14943 382 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 FAM159AQ6UWV7 190 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 TSKUQ8WUA8 353 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 PYGO2Q9BRQ0 406 aa10.88□□□□□ -0.67
VPS18-202ENST00000558474 CA1P00915 261 aaPredicted RBP10.87□□□□□ -0.67
VPS18-202ENST00000558474 GIG44P09565 113 aaPredicted RBP10.87□□□□□ -0.67
VPS18-202ENST00000558474 FXYD7P58549 80 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms