RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 IGLV2-11P01706 119 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 CCL20P78556 96 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 CST9LP1Q5W188 147 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 ZNF493Q6ZR52 646 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 Q6ZTC4 211 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 CCDC28AQ8IWP9 274 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 CYB561D1Q8N8Q1 229 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 RNASE8Q8TDE3 154 aaKnown RBP8.92□□□□□ -0.98
LRRC28-206ENST00000558471 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 LINC00479Q96M42 142 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 ATG101Q9BSB4 218 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 PSG8Q9UQ74 426 aa8.92□□□□□ -0.98
LRRC28-206ENST00000558471 TENM2Q9NT68 2774 aa8.91□□□□□ -0.98
LRRC28-206ENST00000558471 TRAV1-1A0A0B4J248 108 aa8.91□□□□□ -0.98
LRRC28-206ENST00000558471 NUPR2A6NF83 97 aa8.91□□□□□ -0.98
LRRC28-206ENST00000558471 ATP5G3P48201 142 aa8.91□□□□□ -0.98
LRRC28-206ENST00000558471 FLI1Q01543 452 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-206ENST00000558471 TMEM263Q8WUH6 116 aaKnown RBP8.91□□□□□ -0.98
LRRC28-206ENST00000558471 TREM1Q9NP99 234 aa8.91□□□□□ -0.98
LRRC28-206ENST00000558471 TRAV34A0A0B4J273 112 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 PEX7O00628 323 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 Q6AWC8 147 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 PRNTQ86SH4 94 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 EIF4E3Q8N5X7 224 aaKnown RBP8.9□□□□□ -0.98
LRRC28-206ENST00000558471 TMEM75Q8N9X5 138 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 HIST1H2BAQ96A08 127 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 ARL2-SNX15V9GYD0 113 aa8.9□□□□□ -0.98
LRRC28-206ENST00000558471 IGHV1OR15-1A0A075B7D0 117 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 TEX48A0A1B0GUV7 120 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 FBLL1A6NHQ2 334 aaKnown RBP8.89□□□□□ -0.99
LRRC28-206ENST00000558471 CBY3A6NI87 242 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 LYRM9A8MSI8 78 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 C11orf94C9JXX5 98 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 F6UZH7 168 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 RGS13O14921 159 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 ANXA2RQ3ZCQ2 193 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 MUC21Q5SSG8 566 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 ALKAL2Q6UX46 152 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 C8orf49Q96NF6 230 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 NDFIP1Q9BT67 221 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
LRRC28-206ENST00000558471 TP53TG3Q9ULZ0 132 aa8.89□□□□□ -0.99
LRRC28-206ENST00000558471 KLK5Q9Y337 293 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-206ENST00000558471 TIMM8BQ9Y5J9 83 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-206ENST00000558471 TRAV10A0A0B4J240 114 aa8.88□□□□□ -0.99
LRRC28-206ENST00000558471 PPT1P50897 306 aa8.88□□□□□ -0.99
LRRC28-206ENST00000558471 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
LRRC28-206ENST00000558471 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
LRRC28-206ENST00000558471 GSN-AS1Q9NRJ2 163 aa8.88□□□□□ -0.99
LRRC28-206ENST00000558471 DYNC2H1Q8NCM8 4307 aaKnown RBP8.88□□□□□ -0.99
LRRC28-206ENST00000558471 DEFB131BA0A096LNP1 70 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 SNURFLB1AK76 121 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 TEX46H3BTG2 121 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 DEFB130BP0DP73 79 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 DEFB130AP0DP74 79 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 ZNF80P51504 273 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-206ENST00000558471 DAD1P61803 113 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 SAPCD1Q5SSQ6 148 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 C2CD4CQ8TF44 421 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 GNG13Q9P2W3 67 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 KLF12Q9Y4X4 402 aa8.87□□□□□ -0.99
LRRC28-206ENST00000558471 TRAV21A0A0B4J279 112 aa8.86□□□□□ -0.99
LRRC28-206ENST00000558471 GCGP01275 180 aa8.86□□□□□ -0.99
LRRC28-206ENST00000558471 SMUG1Q53HV7 270 aa8.86□□□□□ -0.99
LRRC28-206ENST00000558471 FAM159AQ6UWV7 190 aa8.86□□□□□ -0.99
LRRC28-206ENST00000558471 Q86TA4 180 aa8.86□□□□□ -0.99
LRRC28-206ENST00000558471 ZNF680Q8NEM1 530 aa8.86□□□□□ -0.99
LRRC28-206ENST00000558471 MANBALQ9NQG1 85 aa8.86□□□□□ -0.99
LRRC28-206ENST00000558471 PLECQ15149 4684 aaKnown RBP8.85□□□□□ -0.99
LRRC28-206ENST00000558471 SCO2A0A1W2PP80 73 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 IGLL5B9A064 214 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 HTN3P15516 51 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 AKR1C3P42330 323 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 TCL1AP56279 114 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 UBE2G1P62253 170 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 DAZ2Q13117 558 aaKnown RBP8.85□□□□□ -0.99
LRRC28-206ENST00000558471 TMEM183BQ1AE95 376 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 TDRG1Q3Y452 100 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 IBA57Q5T440 356 aaKnown RBP8.85□□□□□ -0.99
LRRC28-206ENST00000558471 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 FMC1Q96HJ9 113 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 NAGKQ9UJ70 344 aa8.85□□□□□ -0.99
LRRC28-206ENST00000558471 TRBV6-1A0A0K0K1D8 114 aa8.84□□□□□ -0.99
LRRC28-206ENST00000558471 GNRH2O43555 120 aa8.84□□□□□ -0.99
LRRC28-206ENST00000558471 BLOC1S1P78537 153 aa8.84□□□□□ -0.99
LRRC28-206ENST00000558471 Q6ZTI0 123 aa8.84□□□□□ -0.99
LRRC28-206ENST00000558471 TMEM183AQ8IXX5 376 aa8.84□□□□□ -0.99
LRRC28-206ENST00000558471 C11orf21Q9P2W6 132 aa8.84□□□□□ -0.99
LRRC28-206ENST00000558471 ZFP30Q9Y2G7 519 aa8.84□□□□□ -0.99
LRRC28-206ENST00000558471 KMT2CQ8NEZ4 4911 aaKnown RBP8.83□□□□□ -1
LRRC28-206ENST00000558471 GAGE12BA1L429 117 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 GAGE7O76087 117 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 LTAP01374 205 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
LRRC28-206ENST00000558471 GAGE12FP0CL80 117 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 GAGE12GP0CL81 117 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 GAGE12IP0CL82 117 aa8.83□□□□□ -1
LRRC28-206ENST00000558471 CRIP1P50238 77 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms