RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 ORMDL3Q8N138 153 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 BCL6BQ8N143 479 aaPredicted RBP4.33□□□□□ -1.72
GABPB1-207ENST00000558335 PGLYRP4Q96LB8 373 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 C21orf62Q9NYP8 219 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 Q9UFV3 132 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 AHCTF1Q8WYP5 2266 aa4.33□□□□□ -1.72
GABPB1-207ENST00000558335 WDR87Q6ZQQ6 2873 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 A0A0U1RRA0 63 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 WI2-2373I1.2A0A1W2PRP0 233 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 RBAKDNA6NC62 111 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 PCNX2A6NKB5 2137 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 SH2D7A6NKC9 451 aaPredicted RBP4.32□□□□□ -1.72
GABPB1-207ENST00000558335 CGB1A6NKQ9 187 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 TEX22C9J3V5 150 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 K7EMI3 77 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 OVOL1O14753 267 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 NDUFA3O95167 84 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 IL4P05112 153 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 C1orf195Q5TG92 126 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 HCP5Q6MZN7 132 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 IL17RELQ6ZVW7 336 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 LY6G5BQ8NDX9 201 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 MRPL53Q96EL3 112 aaKnown RBP4.32□□□□□ -1.72
GABPB1-207ENST00000558335 SLC50A1Q9BRV3 221 aa4.32□□□□□ -1.72
GABPB1-207ENST00000558335 NXT2Q9NPJ8 142 aaKnown RBP4.32□□□□□ -1.72
GABPB1-207ENST00000558335 BEX4Q9NWD9 120 aaPredicted RBP4.32□□□□□ -1.72
GABPB1-207ENST00000558335 KNTC1P50748 2209 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 XIRP2A4UGR9 3374 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 LAMA3Q16787 3333 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 LY6LH3BQJ8 138 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 PPP1R17O96001 155 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 HBDP02042 147 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 LGALS1P09382 135 aaKnown RBP4.31□□□□□ -1.72
GABPB1-207ENST00000558335 WT1P19544 449 aaPredicted RBP4.31□□□□□ -1.72
GABPB1-207ENST00000558335 PSMB8P28062 276 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 CXCL5P42830 114 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 NMUP48645 174 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 MLANAQ16655 118 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 C12orf74Q32Q52 190 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 TRPT1Q86TN4 253 aaKnown RBP4.31□□□□□ -1.72
GABPB1-207ENST00000558335 TMEM158Q8WZ71 300 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 FAM168AQ92567 244 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 EDA2RQ9HAV5 297 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 U3KQK5 164 aa4.31□□□□□ -1.72
GABPB1-207ENST00000558335 DNAH14Q0VDD8 3507 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 TRAV2A0A0B4J234 112 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 E7EQL1 145 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 E7EUB6 86 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 HOXA3O43365 443 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-207ENST00000558335 APOHP02749 345 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-207ENST00000558335 COX7CP15954 63 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 CKS2P33552 79 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 RPL13AP40429 203 aaKnown RBP4.3□□□□□ -1.72
GABPB1-207ENST00000558335 TIRAPP58753 221 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 CACNG7P62955 275 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 HOXA4Q00056 320 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-207ENST00000558335 EBI3Q14213 229 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 KLK9Q2XQG4 91 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 ZNF672Q499Z4 452 aaPredicted RBP4.3□□□□□ -1.72
GABPB1-207ENST00000558335 C10orf55Q5SWW7 151 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 FAM120AOSQ5T036 256 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 FAM104BQ5XKR9 115 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 LYPD2Q6UXB3 125 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 LINC00336Q6ZUF6 198 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 TMEM86BQ8N661 226 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 ANKRD29Q8N6D5 301 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 ZNF491Q8N8L2 437 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 DPH3Q96FX2 82 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 AJUBAQ96IF1 538 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 ZNF414Q96IQ9 312 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 NAA38Q9BRA0 125 aaKnown RBP4.3□□□□□ -1.72
GABPB1-207ENST00000558335 ZNF747Q9BV97 191 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 JPT2Q9H910 190 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 CTSZQ9UBR2 303 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 KLK9Q9UKQ9 250 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 HILPDAQ9Y5L2 63 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 LENEPQ9Y5L5 61 aa4.3□□□□□ -1.72
GABPB1-207ENST00000558335 IGLV11-55A0A075B6I3 123 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 TRBV7-1A0A0A6YYK4 115 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 TRAV8-4A0A0B4J246 113 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 LINC01546A6NGU7 62 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 K7EIM0 57 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 PLAUP00749 431 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 NPYP01303 97 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 IGKV1-17P01599 117 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 IGLV2-11P01706 119 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 INSL3P51460 131 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 MRGPRG-AS1Q2M3A8 158 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 PRR31Q5SQ13 230 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 NFE4Q86UQ8 179 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 AMN1Q8IY45 258 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 C1orf158Q8N1D5 194 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 ZC2HC1AQ96GY0 325 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 C9orf85Q96MD7 179 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 CNFNQ9BYD5 112 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 RAXQ9Y2V3 346 aa4.29□□□□□ -1.72
GABPB1-207ENST00000558335 FAM186AA6NE01 2351 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms