RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 KRTAP19-4Q3LI73 84 aa7.07□□□□□ -1.28
USP3-207ENST00000558218 FAM122CQ6P4D5 195 aa7.07□□□□□ -1.28
USP3-207ENST00000558218 PQLC2Q6ZP29 291 aa7.07□□□□□ -1.28
USP3-207ENST00000558218 ZFAND2AQ8N6M9 145 aa7.07□□□□□ -1.28
USP3-207ENST00000558218 C11orf72Q8NBR9 251 aa7.07□□□□□ -1.28
USP3-207ENST00000558218 GNPNAT1Q96EK6 184 aaPredicted RBP7.07□□□□□ -1.28
USP3-207ENST00000558218 NACAE9PAV3 2078 aa7.07□□□□□ -1.28
USP3-207ENST00000558218 A0A1W2PPV4 95 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 GAGE12BA1L429 117 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 J3KRW8 73 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 M0R2N4 97 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 RTL8CO15255 209 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 GAGE7O76087 117 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 NUDT3O95989 172 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 GAGE12FP0CL80 117 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 GAGE12GP0CL81 117 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 GAGE12IP0CL82 117 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 TCL1AP56279 114 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 OR5I1Q13606 314 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 ZNF266Q14584 549 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 VGLL1Q99990 258 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 Q9H3A6 140 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 ALG5Q9Y673 324 aa7.06□□□□□ -1.28
USP3-207ENST00000558218 IGHV1OR15-1A0A075B7D0 117 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 TRAV26-1A0A087WT03 109 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 IGKV2-40A0A087WW87 121 aaPredicted RBP7.05□□□□□ -1.28
USP3-207ENST00000558218 A0A1B0GVY2 172 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 DIRC3C9JPN6 131 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 SPINK4O60575 86 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 IGKV2D-40P01614 121 aaPredicted RBP7.05□□□□□ -1.28
USP3-207ENST00000558218 BTF3P20290 206 aaKnown RBP7.05□□□□□ -1.28
USP3-207ENST00000558218 UBE2L3P68036 154 aaKnown RBP7.05□□□□□ -1.28
USP3-207ENST00000558218 SERF2P84101 59 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 SLAQ13239 276 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 SYT8Q8NBV8 401 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 OR2G3Q8NGZ4 309 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 ZNRF2Q8NHG8 242 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 PHYHIPLQ96FC7 376 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 AQP10Q96PS8 301 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 PSMG3Q9BT73 122 aaPredicted RBP7.05□□□□□ -1.28
USP3-207ENST00000558218 SMIM3Q9BZL3 60 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 MED28Q9H204 178 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 WFDC1Q9HC57 220 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 OTORQ9NRC9 128 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 GSN-AS1Q9NRJ2 163 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 TP53TG3Q9ULZ0 132 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 KLF12Q9Y4X4 402 aa7.05□□□□□ -1.28
USP3-207ENST00000558218 PCLOQ9Y6V0 5065 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 DNAH6Q9C0G6 4158 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 IGLV2-18A0A075B6J9 118 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 TRGV2A0A075B6R0 118 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 NBDYA0A0U1RRE5 68 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 KRTAP9-7A8MTY7 169 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 MBP02144 154 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 HOXA5P20719 270 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 BTN1A1Q13410 526 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 Q6AWC8 147 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 Q6ZTI0 123 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 OR10G4Q8NGN3 311 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 OR10G9Q8NGN4 311 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 OR10G7Q8NGN6 311 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 CMTM2Q8TAZ6 248 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 UPK3BQ9BT76 320 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 LINC00588Q9Y4M8 146 aa7.04□□□□□ -1.28
USP3-207ENST00000558218 SERTM2A0A1B0GWG4 89 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 PGPA6NDG6 321 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 TDRG1Q3Y452 100 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 SSX7Q7RTT5 188 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 ST6GAL2Q96JF0 529 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 ARPC5LQ9BPX5 153 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 SPXQ9BT56 116 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 Q9H8V8 135 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 MUC4Q99102 2169 aa7.03□□□□□ -1.28
USP3-207ENST00000558218 TRGV1A0A0A0MS02 117 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 A0A1W2PPQ1 181 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 GIPP09681 153 aaPredicted RBP7.02□□□□□ -1.29
USP3-207ENST00000558218 STAG3L2P0CL84 134 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 STAG3L3P0CL85 134 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 ZNF415Q09FC8 603 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 IQCF2Q8IXL9 164 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 INO80EQ8NBZ0 244 aaPredicted RBP7.02□□□□□ -1.29
USP3-207ENST00000558218 SUN5Q8TC36 379 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 RASL10AQ92737 203 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 TMPRSS5Q9H3S3 457 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 TNFSF18Q9UNG2 199 aa7.02□□□□□ -1.29
USP3-207ENST00000558218 FRAS1Q86XX4 4008 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 TRGV11A0A075B6L2 103 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 FBLL1A6NHQ2 334 aaKnown RBP7.01□□□□□ -1.29
USP3-207ENST00000558218 PLA2G1BP04054 148 aaKnown RBP7.01□□□□□ -1.29
USP3-207ENST00000558218 CDC34P49427 236 aaPredicted RBP7.01□□□□□ -1.29
USP3-207ENST00000558218 RAB2AP61019 212 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 ESRGQ1W209 222 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 TTC32Q5I0X7 151 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 PRR9Q5T870 116 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 FAM159AQ6UWV7 190 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 C6orf223Q8N319 242 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 VSIG2Q96IQ7 327 aa7.01□□□□□ -1.29
USP3-207ENST00000558218 PRO0255Q9UI72 69 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms