RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 IGHV4-4A0A075B6R2 117 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 IGHV1OR15-1A0A075B7D0 117 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 A0A1W2PRE2 83 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 F5H768 121 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 TEX46H3BTG2 121 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 TCRAP04437 139 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 NMBP08949 121 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 CRISP2P16562 243 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 FHITP49789 147 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 MUC21Q5SSG8 566 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 FAM159AQ6UWV7 190 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 DPPA3Q6W0C5 159 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 CYB561D1Q8N8Q1 229 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 ATG101Q9BSB4 218 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 NDUFAF3Q9BU61 184 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 EPDR1Q9UM22 224 aa6.42□□□□□ -1.38
SPG11-207ENST00000558138 TRBV7-9A0A0J9YWB2 115 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 GAGE12BA1L429 117 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 GGTLC3B5MD39 225 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 GAGE7O76087 117 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 H2AFB1P0C5Y9 115 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 GAGE12FP0CL80 117 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 GAGE12GP0CL81 117 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 GAGE12IP0CL82 117 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 TCTAP57738 103 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 UBE2G1P62253 170 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 ZNF415Q09FC8 603 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 LGALSLQ3ZCW2 172 aaPredicted RBP6.41□□□□□ -1.38
SPG11-207ENST00000558138 PRR9Q5T870 116 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 ZFAND2AQ8N6M9 145 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 ARL6IP6Q8N6S5 226 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 RNASE8Q8TDE3 154 aaKnown RBP6.41□□□□□ -1.38
SPG11-207ENST00000558138 FAM19A4Q96LR4 140 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 NKX6-2Q9C056 277 aaPredicted RBP6.41□□□□□ -1.38
SPG11-207ENST00000558138 PSG8Q9UQ74 426 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 LENEPQ9Y5L5 61 aa6.41□□□□□ -1.38
SPG11-207ENST00000558138 TRGV11A0A075B6L2 103 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 TRGV2A0A075B6R0 118 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 TRGV1A0A0A0MS02 117 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 TRAV21A0A0B4J279 112 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 FAM74A7A6NL05 159 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 PEX7O00628 323 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 ATP5G1P05496 136 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 AKR1C3P42330 323 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 ATP5G3P48201 142 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 FLI1Q01543 452 aaPredicted RBP6.4□□□□□ -1.38
SPG11-207ENST00000558138 TMEM183BQ1AE95 376 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 SLC51BQ86UW2 128 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 UBE2DNLQ8IWF7 75 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 TMEM183AQ8IXX5 376 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 TMEM75Q8N9X5 138 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 SUN5Q8TC36 379 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 LINC00476Q8WZB0 136 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 SDF2L1Q9HCN8 221 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 GSN-AS1Q9NRJ2 163 aa6.4□□□□□ -1.38
SPG11-207ENST00000558138 TRAV34A0A0B4J273 112 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 A0A1B0GVG6 124 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 FBLL1A6NHQ2 334 aaKnown RBP6.39□□□□□ -1.39
SPG11-207ENST00000558138 PAGE4O60829 102 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 ZNF324O75467 553 aaPredicted RBP6.39□□□□□ -1.39
SPG11-207ENST00000558138 GCGP01275 180 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 RAB5CP51148 216 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 OR5I1Q13606 314 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 ANXA2RQ3ZCQ2 193 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 SMUG1Q53HV7 270 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 SAPCD1Q5SSQ6 148 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 HIST1H2BAQ96A08 127 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 C8orf49Q96NF6 230 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 GNG13Q9P2W3 67 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 TP53TG3Q9ULZ0 132 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 STARD9Q9P2P6 4700 aa6.39□□□□□ -1.39
SPG11-207ENST00000558138 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
SPG11-207ENST00000558138 PLAC8L1A1L4L8 177 aa6.38□□□□□ -1.39
SPG11-207ENST00000558138 NUDT3O95989 172 aa6.38□□□□□ -1.39
SPG11-207ENST00000558138 IFNA1P01562 189 aa6.38□□□□□ -1.39
SPG11-207ENST00000558138 IBA57Q5T440 356 aaKnown RBP6.38□□□□□ -1.39
SPG11-207ENST00000558138 Q6AWC8 147 aa6.38□□□□□ -1.39
SPG11-207ENST00000558138 Q6ZQT7 251 aa6.38□□□□□ -1.39
SPG11-207ENST00000558138 FMC1Q96HJ9 113 aa6.38□□□□□ -1.39
SPG11-207ENST00000558138 MRPL16Q9NX20 251 aaKnown RBP6.38□□□□□ -1.39
SPG11-207ENST00000558138 NKX2-5P52952 324 aaPredicted RBP6.37□□□□□ -1.39
SPG11-207ENST00000558138 TCL1AP56279 114 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 DAZ2Q13117 558 aaKnown RBP6.37□□□□□ -1.39
SPG11-207ENST00000558138 TMEM88Q6PEY1 159 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 Q6ZTI0 123 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 Q86TA4 180 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 C9orf62Q8N4C0 152 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 MBD3L1Q8WWY6 194 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 TVP23CQ96ET8 276 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 KCNS1Q96KK3 526 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 FAM210BQ96KR6 192 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 LINC00479Q96M42 142 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 LINC00467Q9BRT7 94 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 TCEAL7Q9BRU2 100 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 MANBALQ9NQG1 85 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 APLNQ9ULZ1 77 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 KLF12Q9Y4X4 402 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 ARL2-SNX15V9GYD0 113 aa6.37□□□□□ -1.39
SPG11-207ENST00000558138 A0A0J9YY99 117 aa6.36□□□□□ -1.39
SPG11-207ENST00000558138 IGHV3-53P01767 116 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms