RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 IGKV3-20P01619 116 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 FXYD7P58549 80 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 TMEM241Q24JQ0 296 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 ZNF674Q2M3X9 581 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 CBLN2Q8IUK8 224 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.46□□□□□ -1.54
SPG11-205ENST00000558080 Q8NAQ8 132 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 CSNK1G2-AS1Q8NCQ2 148 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 C11orf52Q96A22 123 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 RPUSD4Q96CM3 377 aaKnown RBP5.46□□□□□ -1.54
SPG11-205ENST00000558080 TCEAL7Q9BRU2 100 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 PARLQ9H300 379 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 SDF2L1Q9HCN8 221 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 XCL2Q9UBD3 114 aa5.46□□□□□ -1.54
SPG11-205ENST00000558080 YTHDF2Q9Y5A9 579 aaKnown RBP5.46□□□□□ -1.54
SPG11-205ENST00000558080 TRAV5A0A0B4J249 113 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 H3BMM0 161 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 H3BRN7 92 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 OR10J4P0C629 311 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 MIFP14174 115 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 ID1P41134 155 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 GDF5OSQ5U4N7 250 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 TMEM88Q6PEY1 159 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 OR8I2Q8N0Y5 310 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 C2CD4CQ8TF44 421 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 FXYD5Q96DB9 178 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 SLC25A39Q9BZJ4 359 aaPredicted RBP5.45□□□□□ -1.54
SPG11-205ENST00000558080 TMEM14CQ9P0S9 112 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 BIRC6Q9NR09 4857 aa5.45□□□□□ -1.54
SPG11-205ENST00000558080 IGLL5B9A064 214 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 NDUFB4O95168 129 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 MT-ND4LP03901 98 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 PYYP10082 97 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 HLA-DRB4P13762 266 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 HLA-DMBP28068 263 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 NUTF2P61970 127 aaKnown RBP5.44□□□□□ -1.54
SPG11-205ENST00000558080 RPL23P62829 140 aaKnown RBP5.44□□□□□ -1.54
SPG11-205ENST00000558080 ADIRFQ15847 76 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 C1orf194Q5T5A4 169 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 MORN5Q5VZ52 161 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 IGFL4Q6B9Z1 124 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 C15orf54Q8N8G6 183 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 OR4B1Q8NGF8 309 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 SHANK2-AS3Q9BTD1 123 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 C1QTNF4Q9BXJ3 329 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 CTDSP1Q9GZU7 261 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 CDIP1Q9H305 208 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 TMA7Q9Y2S6 64 aaKnown RBP5.44□□□□□ -1.54
SPG11-205ENST00000558080 HLA-DRB4X5D2U9 266 aa5.44□□□□□ -1.54
SPG11-205ENST00000558080 IGHV3OR16-12A0A075B7B8 117 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 ZNF98A6NK75 572 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 GGTLC3B5MD39 225 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 C9JCJ5 164 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 F6UB75 175 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 SOCS3O14543 225 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 NBEAP1P0C6P0 100 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 HIST1H1EP10412 219 aaKnown RBP5.43□□□□□ -1.54
SPG11-205ENST00000558080 AKR1C3P42330 323 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 SUMO1P63165 101 aaKnown RBP5.43□□□□□ -1.54
SPG11-205ENST00000558080 LGALS9CQ6DKI2 356 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 Q6ZTC4 211 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 BPIFA4PQ86YQ2 179 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 C16orf92Q96LL3 132 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 SAV1Q9H4B6 383 aaPredicted RBP5.43□□□□□ -1.54
SPG11-205ENST00000558080 TMEM242Q9NWH2 141 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 APLNQ9ULZ1 77 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 CELA1Q9UNI1 258 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 LY96Q9Y6Y9 160 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 NACAE9PAV3 2078 aa5.43□□□□□ -1.54
SPG11-205ENST00000558080 TRAV10A0A0B4J240 114 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 ISLRO14498 428 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 PPP1R2P9O14990 202 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 RPL7P18124 248 aaKnown RBP5.42□□□□□ -1.54
SPG11-205ENST00000558080 GALR1P47211 349 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 CNN1P51911 297 aaKnown RBP5.42□□□□□ -1.54
SPG11-205ENST00000558080 EMP1P54849 157 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 TAS2R60P59551 318 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 C12orf74Q32Q52 190 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 EBLN2Q6P2I7 272 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 FOXI2Q6ZQN5 318 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 LINC01551Q86U37 167 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 LYPD1Q8N2G4 141 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 BLNKQ8WV28 456 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 HIST1H2BAQ96A08 127 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 ANAPC16Q96DE5 110 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 OTORQ9NRC9 128 aa5.42□□□□□ -1.54
SPG11-205ENST00000558080 A0A0J9YX75 114 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 COLCA2A8K830 154 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 H7BYZ3 331 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 PEX7O00628 323 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 SLC25A5P05141 298 aaKnown RBP5.41□□□□□ -1.54
SPG11-205ENST00000558080 S100A9P06702 114 aaKnown RBP5.41□□□□□ -1.54
SPG11-205ENST00000558080 IGLC2P0DOY2 106 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 S100PP25815 95 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 RPL35P42766 123 aaKnown RBP5.41□□□□□ -1.54
SPG11-205ENST00000558080 GNG4P50150 75 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 MEOX2P50222 304 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 RANP62826 216 aaKnown RBP5.41□□□□□ -1.54
SPG11-205ENST00000558080 PSG9Q00887 426 aa5.41□□□□□ -1.54
SPG11-205ENST00000558080 PDE6HQ13956 83 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms