RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RAB2AP61019 212 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 LGALS9BQ3B8N2 356 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 ANXA2RQ3ZCQ2 193 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 Q6ZR54 194 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 Q6ZTI0 123 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 UBE2DNLQ8IWF7 75 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 EIF4E3Q8N5X7 224 aaKnown RBP6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 Q8TAT8 98 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 GSN-AS1Q9NRJ2 163 aa6.14□□□□□ -1.43
SNRPA1-206ENST00000558059 IGLV2-18A0A075B6J9 118 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 A0A1W2PPV4 95 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 PGPA6NDG6 321 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 DIRC3C9JPN6 131 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 RTL8CO15255 209 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 NUDT3O95989 172 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 HOXA5P20719 270 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 HSD17B11Q8NBQ5 300 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 ZNF680Q8NEM1 530 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 OR10G4Q8NGN3 311 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 OR10G9Q8NGN4 311 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 OR10G7Q8NGN6 311 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 OR2G3Q8NGZ4 309 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 PSMG3Q9BT73 122 aaPredicted RBP6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 OTORQ9NRC9 128 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 TP53TG3Q9ULZ0 132 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 KLF12Q9Y4X4 402 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 DYNC1H1Q14204 4646 aaKnown RBP6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 DNAH11Q96DT5 4516 aa6.13□□□□□ -1.43
SNRPA1-206ENST00000558059 IGHV1OR15-1A0A075B7D0 117 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 RNF222A6NCQ9 220 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 HMGB3O15347 200 aaKnown RBP6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 STAG3L2P0CL84 134 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 STAG3L3P0CL85 134 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 ATP6V0CP27449 155 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 TCL1AP56279 114 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 FAM3BP58499 235 aaPredicted RBP6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 OR5I1Q13606 314 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 ZNF266Q14584 549 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 LINC00336Q6ZUF6 198 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 RXFP4Q8TDU9 374 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 ASB13Q8WXK3 278 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 HYLS1Q96M11 299 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 TMPRSS5Q9H3S3 457 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 LENEPQ9Y5L5 61 aa6.12□□□□□ -1.43
SNRPA1-206ENST00000558059 TRAV26-1A0A087WT03 109 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 G3V3Q6 166 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 RGS13O14921 159 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 SPINK4O60575 86 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 ARL14EPLP0DKL9 152 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 CDC34P49427 236 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 SERF2P84101 59 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 RGS21Q2M5E4 152 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 IBA57Q5T440 356 aaKnown RBP6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 Q6AWC8 147 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 ARL6IP6Q8N6S5 226 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 ZNRF2Q8NHG8 242 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 SUN5Q8TC36 379 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 TMED6Q8WW62 240 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 RAB24Q969Q5 203 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 GNPNAT1Q96EK6 184 aaPredicted RBP6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 C18orf15Q96N68 181 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 ATG101Q9BSB4 218 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 SH3BGRL3Q9H299 93 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 TNFSF18Q9UNG2 199 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 LINC00588Q9Y4M8 146 aa6.11□□□□□ -1.43
SNRPA1-206ENST00000558059 FXYD6-FXYD2A0A087WZ82 144 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 TRGV1A0A0A0MS02 117 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 A0A0J9YY99 117 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 H3BNG1 76 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 MBP02144 154 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 GCHFRP30047 84 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 CCL18P55774 89 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 GNG5P63218 68 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 RPL7L1Q6DKI1 246 aaKnown RBP6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 GOLT1AQ6ZVE7 132 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 INO80EQ8NBZ0 244 aaPredicted RBP6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 OR2T35Q8NGX2 323 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 CMTM2Q8TAZ6 248 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 TVP23CQ96ET8 276 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 VSIG2Q96IQ7 327 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 MDFICQ9P1T7 246 aa6.1□□□□□ -1.43
SNRPA1-206ENST00000558059 TRGV2A0A075B6R0 118 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 TRAV8-1A0A0A6YYK1 113 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 PRSS29PA6NIE9 313 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 FAM74A1Q5RGS3 127 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 MUC21Q5SSG8 566 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 SSX7Q7RTT5 188 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 ST6GAL2Q96JF0 529 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 ARPC5LQ9BPX5 153 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 RPH3ALQ9UNE2 315 aa6.09□□□□□ -1.43
SNRPA1-206ENST00000558059 A0A096LPF7 62 aa6.08□□□□□ -1.44
SNRPA1-206ENST00000558059 BORCS7-ASMTA0A0B4J1R7 106 aa6.08□□□□□ -1.44
SNRPA1-206ENST00000558059 NBDYA0A0U1RRE5 68 aa6.08□□□□□ -1.44
SNRPA1-206ENST00000558059 ZNF415Q09FC8 603 aa6.08□□□□□ -1.44
SNRPA1-206ENST00000558059 ESRGQ1W209 222 aa6.08□□□□□ -1.44
SNRPA1-206ENST00000558059 TDRG1Q3Y452 100 aa6.08□□□□□ -1.44
SNRPA1-206ENST00000558059 C1orf134Q5TEV5 83 aa6.08□□□□□ -1.44
SNRPA1-206ENST00000558059 SGK494Q96LW2 274 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms