RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 PQLC2Q6ZP29 291 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 STXBP6Q8NFX7 210 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 LYPD6BQ8NI32 183 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 SFT2D1Q8WV19 159 aa9.1□□□□□ -0.95
TMEM260-215ENST00000557626 ZNF331Q9NQX6 463 aaPredicted RBP9.1□□□□□ -0.95
TMEM260-215ENST00000557626 TRAV2A0A0B4J234 112 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 KNCNA6PVL3 124 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 CD5P06127 495 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 NMBP08949 121 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 H2AFB1P0C5Y9 115 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 TAS2R45P59539 299 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 DAD1P61803 113 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 S100A7AQ86SG5 101 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 NEU1Q99519 415 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.95
TMEM260-215ENST00000557626 A0A1B0GV50 99 aa9.08□□□□□ -0.96
TMEM260-215ENST00000557626 CXorf1O96002 111 aa9.08□□□□□ -0.96
TMEM260-215ENST00000557626 S100A7P31151 101 aa9.08□□□□□ -0.96
TMEM260-215ENST00000557626 UBE2L3P68036 154 aaKnown RBP9.08□□□□□ -0.96
TMEM260-215ENST00000557626 RNF182Q8N6D2 247 aa9.08□□□□□ -0.96
TMEM260-215ENST00000557626 BLNKQ8WV28 456 aa9.08□□□□□ -0.96
TMEM260-215ENST00000557626 XCL2Q9UBD3 114 aa9.08□□□□□ -0.96
TMEM260-215ENST00000557626 YTHDF2Q9Y5A9 579 aaKnown RBP9.08□□□□□ -0.96
TMEM260-215ENST00000557626 A0A087WTM6 91 aa9.07□□□□□ -0.96
TMEM260-215ENST00000557626 ZNF253O75346 499 aa9.07□□□□□ -0.96
TMEM260-215ENST00000557626 ZNF688P0C7X2 276 aa9.07□□□□□ -0.96
TMEM260-215ENST00000557626 ACTL10Q5JWF8 245 aa9.07□□□□□ -0.96
TMEM260-215ENST00000557626 EXOC3-AS1Q8N2X6 119 aa9.07□□□□□ -0.96
TMEM260-215ENST00000557626 RNF24Q9Y225 148 aa9.07□□□□□ -0.96
TMEM260-215ENST00000557626 SMIM9A6NGZ8 99 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 ZNF705FA8MVS1 300 aaPredicted RBP9.06□□□□□ -0.96
TMEM260-215ENST00000557626 GGTLC3B5MD39 225 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 PRAC2D3DTV9 90 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 M0R3E3 92 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 ISLRO14498 428 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 IFNA7P01567 189 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 GUK1Q16774 197 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 LELP1Q5T871 98 aa9.06□□□□□ -0.96
TMEM260-215ENST00000557626 FAM74A7A6NL05 159 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 PSMB3P49720 205 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 MEOX2P50222 304 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 RANP62826 216 aaKnown RBP9.05□□□□□ -0.96
TMEM260-215ENST00000557626 BLOC1S1P78537 153 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 PDE6HQ13956 83 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 GDF5OSQ5U4N7 250 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 ZNF705AQ6ZN79 300 aaPredicted RBP9.05□□□□□ -0.96
TMEM260-215ENST00000557626 C16orf92Q96LL3 132 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 FAM30AQ9NZY2 134 aa9.05□□□□□ -0.96
TMEM260-215ENST00000557626 IGHV3OR16-12A0A075B7B8 117 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 F6UB75 175 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 TEX46H3BTG2 121 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 RGS13O14921 159 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 ZNF705DP0CH99 300 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-215ENST00000557626 ZNF705BP0CI00 300 aaPredicted RBP9.04□□□□□ -0.96
TMEM260-215ENST00000557626 UBE2G2P60604 165 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 NUTF2P61970 127 aaKnown RBP9.04□□□□□ -0.96
TMEM260-215ENST00000557626 PSG3Q16557 428 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 CCDC28AQ8IWP9 274 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 SLC50A1Q9BRV3 221 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 TMEM167BQ9NRX6 74 aa9.04□□□□□ -0.96
TMEM260-215ENST00000557626 IGLV5-52A0A0A0MRZ9 124 aa9.03□□□□□ -0.96
TMEM260-215ENST00000557626 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
TMEM260-215ENST00000557626 PAGE4O60829 102 aa9.03□□□□□ -0.96
TMEM260-215ENST00000557626 ATP5G3P48201 142 aa9.03□□□□□ -0.96
TMEM260-215ENST00000557626 IQCF2Q8IXL9 164 aa9.03□□□□□ -0.96
TMEM260-215ENST00000557626 LINC00052Q96N35 136 aa9.03□□□□□ -0.96
TMEM260-215ENST00000557626 UPK3BQ9BT76 320 aa9.03□□□□□ -0.96
TMEM260-215ENST00000557626 PGPA6NDG6 321 aa9.02□□□□□ -0.97
TMEM260-215ENST00000557626 F5H768 121 aa9.02□□□□□ -0.97
TMEM260-215ENST00000557626 HBE1P02100 147 aa9.02□□□□□ -0.97
TMEM260-215ENST00000557626 SUMO1P63165 101 aaKnown RBP9.02□□□□□ -0.97
TMEM260-215ENST00000557626 GNG5P63218 68 aa9.02□□□□□ -0.97
TMEM260-215ENST00000557626 LRRC20Q8TCA0 184 aa9.02□□□□□ -0.97
TMEM260-215ENST00000557626 OTORQ9NRC9 128 aa9.02□□□□□ -0.97
TMEM260-215ENST00000557626 GNG13Q9P2W3 67 aa9.02□□□□□ -0.97
TMEM260-215ENST00000557626 A0A0J9YX75 114 aa9.01□□□□□ -0.97
TMEM260-215ENST00000557626 A8MTW9 85 aa9.01□□□□□ -0.97
TMEM260-215ENST00000557626 MT1HL1P0DM35 61 aa9.01□□□□□ -0.97
TMEM260-215ENST00000557626 ID1P41134 155 aa9.01□□□□□ -0.97
TMEM260-215ENST00000557626 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
TMEM260-215ENST00000557626 PSG9Q00887 426 aa9.01□□□□□ -0.97
TMEM260-215ENST00000557626 CLLU1Q5K131 121 aa9.01□□□□□ -0.97
TMEM260-215ENST00000557626 RPUSD4Q96CM3 377 aaKnown RBP9.01□□□□□ -0.97
TMEM260-215ENST00000557626 MRPL53Q96EL3 112 aaKnown RBP9.01□□□□□ -0.97
TMEM260-215ENST00000557626 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
TMEM260-215ENST00000557626 LOC102723971A0A1B0GUV8 181 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 H3BMM0 161 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 RS1O15537 224 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
TMEM260-215ENST00000557626 BCL2P10415 239 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 SNRPD3P62318 126 aaKnown RBP9□□□□□ -0.97
TMEM260-215ENST00000557626 SRSF3P84103 164 aaKnown RBP9□□□□□ -0.97
TMEM260-215ENST00000557626 SAMD13Q5VXD3 122 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 AMTNQ6UX39 209 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 ZNF738Q8NE65 137 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 VGLL1Q99990 258 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 SAV1Q9H4B6 383 aaPredicted RBP9□□□□□ -0.97
TMEM260-215ENST00000557626 ARL2-SNX15V9GYD0 113 aa9□□□□□ -0.97
TMEM260-215ENST00000557626 DIRC3C9JPN6 131 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms