RNA–Protein interactions for RNA: ENST00000557478.5

NEDD1-212, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 5

Gene NEDD1, Length 595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-212ENST00000557478 ZNF415Q09FC8 603 aa12.24□□□□□ -0.45
NEDD1-212ENST00000557478 TTC32Q5I0X7 151 aa12.24□□□□□ -0.45
NEDD1-212ENST00000557478 WFDC1Q9HC57 220 aa12.24□□□□□ -0.45
NEDD1-212ENST00000557478 IGLV2-18A0A075B6J9 118 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 TRGV11A0A075B6L2 103 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 BORCS7-ASMTA0A0B4J1R7 106 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 PGPA6NDG6 321 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 CDC34P49427 236 aaPredicted RBP12.23□□□□□ -0.45
NEDD1-212ENST00000557478 Q6AWC8 147 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 FAM159AQ6UWV7 190 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 Q6ZTI0 123 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 ZNRF2Q8NHG8 242 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 TP53TG3Q9ULZ0 132 aa12.23□□□□□ -0.45
NEDD1-212ENST00000557478 FBLL1A6NHQ2 334 aaKnown RBP12.22□□□□□ -0.45
NEDD1-212ENST00000557478 SSX7Q7RTT5 188 aa12.22□□□□□ -0.45
NEDD1-212ENST00000557478 ST6GAL2Q96JF0 529 aa12.22□□□□□ -0.45
NEDD1-212ENST00000557478 HYLS1Q96M11 299 aa12.22□□□□□ -0.45
NEDD1-212ENST00000557478 SPXQ9BT56 116 aa12.22□□□□□ -0.45
NEDD1-212ENST00000557478 TMPRSS5Q9H3S3 457 aa12.22□□□□□ -0.45
NEDD1-212ENST00000557478 TNFSF18Q9UNG2 199 aa12.22□□□□□ -0.45
NEDD1-212ENST00000557478 KLF12Q9Y4X4 402 aa12.22□□□□□ -0.45
NEDD1-212ENST00000557478 NBDYA0A0U1RRE5 68 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 RTL8CO15255 209 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 RGS21Q2M5E4 152 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 TDRG1Q3Y452 100 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 HSD17B11Q8NBQ5 300 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 NDFIP1Q9BT67 221 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 TMEM167BQ9NRX6 74 aa12.21□□□□□ -0.45
NEDD1-212ENST00000557478 TRAV21A0A0B4J279 112 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 A0A1W2PPQ1 181 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 CXorf1O96002 111 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 STAG3L2P0CL84 134 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 STAG3L3P0CL85 134 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 HOXA5P20719 270 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 RAB2AP61019 212 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 Q8TAT8 98 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 ACTR3CQ9C0K3 210 aaPredicted RBP12.2□□□□□ -0.46
NEDD1-212ENST00000557478 LINC00588Q9Y4M8 146 aa12.2□□□□□ -0.46
NEDD1-212ENST00000557478 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
NEDD1-212ENST00000557478 SUN5Q8TC36 379 aa12.19□□□□□ -0.46
NEDD1-212ENST00000557478 KCNS1Q96KK3 526 aa12.19□□□□□ -0.46
NEDD1-212ENST00000557478 Q9H8V8 135 aa12.19□□□□□ -0.46
NEDD1-212ENST00000557478 PRO0255Q9UI72 69 aa12.19□□□□□ -0.46
NEDD1-212ENST00000557478 A0A0J9YY99 117 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 TAAR5O14804 337 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 ARL14EPLP0DKL9 152 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 ATP6V0CP27449 155 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 PRR9Q5T870 116 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 GOLT1AQ6ZVE7 132 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 RASL10AQ92737 203 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 RAB24Q969Q5 203 aa12.18□□□□□ -0.46
NEDD1-212ENST00000557478 MRPS16Q9Y3D3 137 aaKnown RBP12.18□□□□□ -0.46
NEDD1-212ENST00000557478 A0A1B0GVY2 172 aa12.17□□□□□ -0.46
NEDD1-212ENST00000557478 PAX4O43316 350 aa12.17□□□□□ -0.46
NEDD1-212ENST00000557478 IQCF2Q8IXL9 164 aa12.17□□□□□ -0.46
NEDD1-212ENST00000557478 C6orf223Q8N319 242 aa12.17□□□□□ -0.46
NEDD1-212ENST00000557478 OR2T35Q8NGX2 323 aa12.17□□□□□ -0.46
NEDD1-212ENST00000557478 NKX6-2Q9C056 277 aaPredicted RBP12.17□□□□□ -0.46
NEDD1-212ENST00000557478 TREM1Q9NP99 234 aa12.17□□□□□ -0.46
NEDD1-212ENST00000557478 ICOSQ9Y6W8 199 aa12.17□□□□□ -0.46
NEDD1-212ENST00000557478 GCHFRP30047 84 aa12.16□□□□□ -0.46
NEDD1-212ENST00000557478 HHLA3Q9XRX5 114 aa12.16□□□□□ -0.46
NEDD1-212ENST00000557478 FXYD6-FXYD2A0A087WZ82 144 aa12.15□□□□□ -0.46
NEDD1-212ENST00000557478 CIDEAO60543 219 aa12.15□□□□□ -0.46
NEDD1-212ENST00000557478 MRPL23Q16540 153 aaKnown RBP12.15□□□□□ -0.46
NEDD1-212ENST00000557478 ZFP69Q49AA0 526 aa12.15□□□□□ -0.46
NEDD1-212ENST00000557478 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
NEDD1-212ENST00000557478 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
NEDD1-212ENST00000557478 A0A1W2PRE2 83 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 K7EP13 123 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 ORM1P02763 201 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 TCRAP04437 139 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 TMEM183BQ1AE95 376 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 ESRGQ1W209 222 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 MUC21Q5SSG8 566 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 SAPCD1Q5SSQ6 148 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 TMEM183AQ8IXX5 376 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 VSIG2Q96IQ7 327 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
NEDD1-212ENST00000557478 DNAH2Q9P225 4427 aa12.14□□□□□ -0.47
NEDD1-212ENST00000557478 A0A096LPF7 62 aa12.13□□□□□ -0.47
NEDD1-212ENST00000557478 TRGV4A0A0C4DH28 118 aa12.13□□□□□ -0.47
NEDD1-212ENST00000557478 M0R2P5 195 aa12.13□□□□□ -0.47
NEDD1-212ENST00000557478 HMGB3O15347 200 aaKnown RBP12.13□□□□□ -0.47
NEDD1-212ENST00000557478 MED14OSP0DP75 135 aa12.13□□□□□ -0.47
NEDD1-212ENST00000557478 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
NEDD1-212ENST00000557478 CYB561D1Q8N8Q1 229 aa12.13□□□□□ -0.47
NEDD1-212ENST00000557478 PCNPQ8WW12 178 aaKnown RBP12.13□□□□□ -0.47
NEDD1-212ENST00000557478 BOLA1Q9Y3E2 137 aa12.13□□□□□ -0.47
NEDD1-212ENST00000557478 RNF222A6NCQ9 220 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 PPT1P50897 306 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 CRYBA4P53673 196 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 AKR1C8PQ5T2L2 129 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 TMEM75Q8N9X5 138 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 MDFICQ9P1T7 246 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 NAGKQ9UJ70 344 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 EPDR1Q9UM22 224 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 FAT2Q9NYQ8 4349 aa12.12□□□□□ -0.47
NEDD1-212ENST00000557478 DNAH17Q9UFH2 4485 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms