RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TRAV13-2A0A0B4J235 113 aa6.66□□□□□ -1.34
CHD8-213ENST00000557364 Q8N8P6 123 aa6.66□□□□□ -1.34
CHD8-213ENST00000557364 NPBQ8NG41 125 aa6.66□□□□□ -1.34
CHD8-213ENST00000557364 CLPSL1A2RUU4 121 aa6.65□□□□□ -1.34
CHD8-213ENST00000557364 PRSS57Q6UWY2 283 aa6.65□□□□□ -1.34
CHD8-213ENST00000557364 ANGP03950 147 aaKnown RBP6.65□□□□□ -1.34
CHD8-213ENST00000557364 Q71RC1 249 aaPredicted RBP6.65□□□□□ -1.34
CHD8-213ENST00000557364 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
CHD8-213ENST00000557364 NAV3Q8IVL0 2385 aa6.65□□□□□ -1.34
CHD8-213ENST00000557364 NCR2O95944 276 aa6.65□□□□□ -1.34
CHD8-213ENST00000557364 ESDP10768 282 aa6.65□□□□□ -1.34
CHD8-213ENST00000557364 C14orf177Q52M58 125 aa6.65□□□□□ -1.34
CHD8-213ENST00000557364 IGF2BP2-AS1Q96M15 143 aa6.65□□□□□ -1.35
CHD8-213ENST00000557364 MED12LQ86YW9 2145 aa6.65□□□□□ -1.35
CHD8-213ENST00000557364 IGHV3-64A0A075B6Q5 118 aa6.65□□□□□ -1.35
CHD8-213ENST00000557364 UBE2BP63146 152 aa6.65□□□□□ -1.35
CHD8-213ENST00000557364 FAM231DQ6ZW35 169 aa6.65□□□□□ -1.35
CHD8-213ENST00000557364 LURAP1LQ8IV03 231 aa6.65□□□□□ -1.35
CHD8-213ENST00000557364 PRR25Q96S07 402 aa6.65□□□□□ -1.35
CHD8-213ENST00000557364 C15orf65H3BRN8 121 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 MMP23AO75900 390 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 ATP5G1P05496 136 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 SAMD5Q5TGI4 173 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 WIPF2Q8TF74 440 aaPredicted RBP6.64□□□□□ -1.35
CHD8-213ENST00000557364 A0A0U1RRA0 63 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 CENPVL3A0A0U1RRI6 287 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 ARHGAP21Q5T5U3 1957 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 ZNRF2Q8NHG8 242 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 C20orf144Q9BQM9 153 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 SDHAF1A6NFY7 115 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 LINC01545Q5VT33 79 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 H3BUT2 72 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 UBE2CO00762 179 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 DAZ2Q13117 558 aaKnown RBP6.64□□□□□ -1.35
CHD8-213ENST00000557364 DAZ4Q86SG3 579 aaKnown RBP6.64□□□□□ -1.35
CHD8-213ENST00000557364 DAZ3Q9NR90 486 aaKnown RBP6.64□□□□□ -1.35
CHD8-213ENST00000557364 IGHV4-59P01825 116 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 FAM104BQ5XKR9 115 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 TP53TG1Q9Y2A0 90 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 SMAD5-AS1Q9Y6J3 95 aa6.64□□□□□ -1.35
CHD8-213ENST00000557364 STPG4Q8N801 248 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 TRBV20-1A0A075B6N2 111 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 LOXL1Q08397 574 aaPredicted RBP6.63□□□□□ -1.35
CHD8-213ENST00000557364 C2orf82Q6UX34 121 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 NCOA6Q14686 2063 aaPredicted RBP6.63□□□□□ -1.35
CHD8-213ENST00000557364 OBSL1O75147 1896 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 TRAV8-1A0A0A6YYK1 113 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 SOCS3O14543 225 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 SNAI2O43623 268 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BKO60814 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BJP06899 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HLA-DRB4P13762 266 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BOP23527 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BBP33778 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BDP58876 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BCP62807 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST2H2BEQ16778 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BHQ93079 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BNQ99877 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HIST1H2BMQ99879 126 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 CITED1Q99966 193 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 HLA-DRB4X5D2U9 266 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 CSPG4Q6UVK1 2322 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 IGKV2D-24A0A075B6R9 120 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 K7EMT4 169 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 GAGE2EQ4V326 116 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 C2orf66Q6UXQ4 117 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 C4orf3Q8WVX3 66 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 VSIRQ9H7M9 311 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 GAGE2DQ9UEU5 116 aa6.63□□□□□ -1.35
CHD8-213ENST00000557364 KIAA1549LQ6ZVL6 1849 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 A0A1B0GV90 55 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 SYS1-DBNDD2H3BUS1 97 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 HERV-K104P63124 156 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 PIFOQ8TCI5 191 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 PRORYQ9H606 182 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 AMN1Q8IY45 258 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 IGLC1P0CG04 106 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 PRSS29PA6NIE9 313 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 KLK9Q9UKQ9 250 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 IGHV4-61A0A0C4DH41 118 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 VOPP1Q96AW1 172 aa6.62□□□□□ -1.35
CHD8-213ENST00000557364 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 NDUFAF3Q9BU61 184 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 IGHV4-30-2A0A087WSY4 118 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 GAGE6Q13070 117 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 CFHR3Q02985 330 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 C4orf48Q5BLP8 95 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 MRAPQ8TCY5 172 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 IL15RAQ13261 267 aa6.61□□□□□ -1.35
CHD8-213ENST00000557364 TAL2Q16559 108 aa6.6□□□□□ -1.35
CHD8-213ENST00000557364 ZC2HC1BQ5TFG8 222 aa6.6□□□□□ -1.35
CHD8-213ENST00000557364 MRPL36Q9P0J6 103 aaKnown RBP6.6□□□□□ -1.35
CHD8-213ENST00000557364 WT1-ASQ06250 92 aa6.6□□□□□ -1.35
CHD8-213ENST00000557364 GUSBP1Q15486 140 aa6.6□□□□□ -1.35
CHD8-213ENST00000557364 ANXA2RQ3ZCQ2 193 aa6.6□□□□□ -1.35
CHD8-213ENST00000557364 WDR86Q86TI4 376 aa6.6□□□□□ -1.35
CHD8-213ENST00000557364 SMIM2Q9BVW6 85 aa6.6□□□□□ -1.35
CHD8-213ENST00000557364 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms