RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FAM210BQ96KR6 192 aa8.89□□□□□ -0.99
SLIRP-209ENST00000557342 TENM2Q9NT68 2774 aa8.88□□□□□ -0.99
SLIRP-209ENST00000557342 IGHV4-4A0A075B6R2 117 aa8.88□□□□□ -0.99
SLIRP-209ENST00000557342 SUMO1P63165 101 aaKnown RBP8.88□□□□□ -0.99
SLIRP-209ENST00000557342 ANXA2RQ3ZCQ2 193 aa8.88□□□□□ -0.99
SLIRP-209ENST00000557342 EIF4E3Q8N5X7 224 aaKnown RBP8.88□□□□□ -0.99
SLIRP-209ENST00000557342 NKX6-2Q9C056 277 aaPredicted RBP8.88□□□□□ -0.99
SLIRP-209ENST00000557342 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
SLIRP-209ENST00000557342 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
SLIRP-209ENST00000557342 MAP1LC3B2A6NCE7 125 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 FBLL1A6NHQ2 334 aaKnown RBP8.87□□□□□ -0.99
SLIRP-209ENST00000557342 CBY3A6NI87 242 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 TCRAP04437 139 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 DEFB130BP0DP73 79 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 DEFB130AP0DP74 79 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 GNG5P63218 68 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 PRR9Q5T870 116 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 LGALS9CQ6DKI2 356 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 ALKAL2Q6UX46 152 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 DPPA3Q6W0C5 159 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 NDFIP1Q9BT67 221 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 NDUFAF3Q9BU61 184 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 MAP1LC3BQ9GZQ8 125 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
SLIRP-209ENST00000557342 EPDR1Q9UM22 224 aa8.87□□□□□ -0.99
SLIRP-209ENST00000557342 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
SLIRP-209ENST00000557342 GGTLC3B5MD39 225 aa8.86□□□□□ -0.99
SLIRP-209ENST00000557342 HTN3P15516 51 aa8.86□□□□□ -0.99
SLIRP-209ENST00000557342 SULT1A2P50226 295 aa8.86□□□□□ -0.99
SLIRP-209ENST00000557342 RAB5CP51148 216 aa8.86□□□□□ -0.99
SLIRP-209ENST00000557342 FGF8P55075 233 aaPredicted RBP8.86□□□□□ -0.99
SLIRP-209ENST00000557342 Q6AWC8 147 aa8.86□□□□□ -0.99
SLIRP-209ENST00000557342 TMPRSS5Q9H3S3 457 aa8.86□□□□□ -0.99
SLIRP-209ENST00000557342 ATP5G1P05496 136 aa8.85□□□□□ -0.99
SLIRP-209ENST00000557342 ATP5G3P48201 142 aa8.85□□□□□ -0.99
SLIRP-209ENST00000557342 DAZ2Q13117 558 aaKnown RBP8.85□□□□□ -0.99
SLIRP-209ENST00000557342 IBA57Q5T440 356 aaKnown RBP8.85□□□□□ -0.99
SLIRP-209ENST00000557342 CYB561D1Q8N8Q1 229 aa8.85□□□□□ -0.99
SLIRP-209ENST00000557342 FAM213BQ8TBF2 198 aa8.85□□□□□ -0.99
SLIRP-209ENST00000557342 ATG101Q9BSB4 218 aa8.85□□□□□ -0.99
SLIRP-209ENST00000557342 TREM1Q9NP99 234 aa8.85□□□□□ -0.99
SLIRP-209ENST00000557342 LYSTQ99698 3801 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 TRAV8-1A0A0A6YYK1 113 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 TRAV21A0A0B4J279 112 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 FAM74A7A6NL05 159 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 PPT1P50897 306 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 UBE2G2P60604 165 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 FAM159AQ6UWV7 190 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 LINC00612Q8N6U2 182 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 TMEM75Q8N9X5 138 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 C11orf72Q8NBR9 251 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 MBD3L1Q8WWY6 194 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 GSN-AS1Q9NRJ2 163 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 PSG8Q9UQ74 426 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 ARL2-SNX15V9GYD0 113 aa8.84□□□□□ -0.99
SLIRP-209ENST00000557342 F6UZH7 168 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 FHITP49789 147 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 TCL1AP56279 114 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 FLI1Q01543 452 aaPredicted RBP8.83□□□□□ -1
SLIRP-209ENST00000557342 ZNF415Q09FC8 603 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 SAPCD1Q5SSQ6 148 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 SFT2D1Q8WV19 159 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 HIST1H2BAQ96A08 127 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 TCEAL7Q9BRU2 100 aa8.83□□□□□ -1
SLIRP-209ENST00000557342 DYNC2H1Q8NCM8 4307 aaKnown RBP8.83□□□□□ -1
SLIRP-209ENST00000557342 TRGV11A0A075B6L2 103 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 GAGE12BA1L429 117 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 F5H768 121 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 PEX7O00628 323 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 GAGE7O76087 117 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 H2AFB1P0C5Y9 115 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 GAGE12FP0CL80 117 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 GAGE12GP0CL81 117 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 GAGE12IP0CL82 117 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 MUC21Q5SSG8 566 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 Q6ZQT7 251 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 PRNTQ86SH4 94 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 TVP23CQ96ET8 276 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 SGK494Q96LW2 274 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 TP53TG3Q9ULZ0 132 aa8.82□□□□□ -1
SLIRP-209ENST00000557342 IGLV2-11P01706 119 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 P0DMU3 169 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 FAM231AP0DMU4 169 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 FAM231CP0DMU5 169 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 RAB14P61106 215 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 LGALS9BQ3B8N2 356 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 TDRG1Q3Y452 100 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 SMUG1Q53HV7 270 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 CLLU1Q5K131 121 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 CST9LP1Q5W188 147 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 TMEM88Q6PEY1 159 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 KCNS1Q96KK3 526 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 NAGKQ9UJ70 344 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 KLF12Q9Y4X4 402 aa8.81□□□□□ -1
SLIRP-209ENST00000557342 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
SLIRP-209ENST00000557342 TRGV2A0A075B6R0 118 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 TRGV1A0A0A0MS02 117 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 TEX46H3BTG2 121 aa8.8□□□□□ -1
SLIRP-209ENST00000557342 SPINK4O60575 86 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms