RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 POM121L12Q8N7R1 296 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 ENKURQ8TC29 256 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 PXMP4Q9Y6I8 212 aa6.95□□□□□ -1.3
HNRNPC-228ENST00000557033 TRAV12-2A0A075B6T6 113 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 TRAV26-1A0A087WT03 109 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 IGSF23A1L1A6 192 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 ZNF705GA8MUZ8 300 aaPredicted RBP6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 ZNF253O75346 499 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 TAS2R60P59551 318 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 DAD1P61803 113 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 CYCSP99999 105 aaKnown RBP6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 MIC13Q5XKP0 118 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 OR10J6PQ8NGY7 276 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 LINC01587Q99440 93 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 C20orf144Q9BQM9 153 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 NMES1Q9C002 83 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 SLC39A9Q9NUM3 307 aa6.94□□□□□ -1.3
HNRNPC-228ENST00000557033 H3BQ15 152 aa6.93□□□□□ -1.3
HNRNPC-228ENST00000557033 BAXQ07812 192 aa6.93□□□□□ -1.3
HNRNPC-228ENST00000557033 ZNF493Q6ZR52 646 aa6.93□□□□□ -1.3
HNRNPC-228ENST00000557033 BAP18Q8IXM2 172 aa6.93□□□□□ -1.3
HNRNPC-228ENST00000557033 SLC25A31Q9H0C2 315 aa6.93□□□□□ -1.3
HNRNPC-228ENST00000557033 TMEM14CQ9P0S9 112 aa6.93□□□□□ -1.3
HNRNPC-228ENST00000557033 TRAV5A0A0B4J249 113 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 UBE2L5PA0A1B0GUS4 154 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 INMT-MINDY4F8WBC2 141 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 H7BYZ3 331 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 TSHBP01222 138 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 PRM2P04554 102 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 SNRPCP09234 159 aaKnown RBP6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 HTN3P15516 51 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 AZU1P20160 251 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 FGF7P21781 194 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 IFITM3Q01628 133 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 RNF212Q495C1 297 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 XP32Q5T750 250 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 Q6ZVQ6 151 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 RPL36ALQ969Q0 106 aaKnown RBP6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 MARVELD1Q9BSK0 173 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 ZNF586Q9NXT0 402 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 FRAS1Q86XX4 4008 aa6.92□□□□□ -1.3
HNRNPC-228ENST00000557033 TRBV19A0A075B6N1 114 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 PLAC8L1A1L4L8 177 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 PCP4L1A6NKN8 68 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 PRAC2D3DTV9 90 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 SLC17A3O00476 420 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 HIST1H1EP10412 219 aaKnown RBP6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 RIGQ13278 110 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 LGALS9BQ3B8N2 356 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 LINC00336Q6ZUF6 198 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 C15orf53Q8NAA6 179 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 OR5C1Q8NGR4 320 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 ST6GAL2Q96JF0 529 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 NPCDR1Q9BY65 106 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 PRELID1Q9Y255 219 aa6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 TIMM8BQ9Y5J9 83 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-228ENST00000557033 SERTM2A0A1B0GWG4 89 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 SIX6O95475 246 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 DEFB130BP0DP73 79 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 DEFB130AP0DP74 79 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 HTN1P15515 57 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 LEPP41159 167 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 DEFA1P59665 94 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 DEFA3P59666 94 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 PDE6HQ13956 83 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 UBE2DNLQ8IWF7 75 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 TMEM263Q8WUH6 116 aaKnown RBP6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 KCNIP2Q9NS61 270 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 OR5AC2Q9NZP5 309 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 TIMM9Q9Y5J7 89 aa6.9□□□□□ -1.3
HNRNPC-228ENST00000557033 ATP5G1P05496 136 aa6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 CT45A10P0DMU9 189 aa6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 ATP5G3P48201 142 aa6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 FCN2Q15485 313 aa6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 GFI1BQ5VTD9 330 aa6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 LINC00477Q96M19 166 aa6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 WDR61Q9GZS3 305 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 BATF3Q9NR55 127 aa6.89□□□□□ -1.31
HNRNPC-228ENST00000557033 C17orf112F2Z3M2 114 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 F5H768 121 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 SLC25A5P05141 298 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 NMBP08949 121 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 PET100P0DJ07 73 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 H2BFSP57053 126 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 PPP1R1CQ8WVI7 109 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 MRPL32Q9BYC8 188 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 MBD2Q9UBB5 411 aa6.88□□□□□ -1.31
HNRNPC-228ENST00000557033 M0R3E3 92 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 SSNA1O43805 119 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 MPC2O95563 127 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 NBEAP1P0C6P0 100 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 PYYP10082 97 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 PRB4P10163 310 aaPredicted RBP6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 CLINT1Q14677 625 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 GCSAMLQ5JQS6 135 aa6.87□□□□□ -1.31
HNRNPC-228ENST00000557033 C9orf47Q6ZRZ4 202 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms