RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 TMEM167BQ9NRX6 74 aa7.55□□□□□ -1.2
GABRB3-211ENST00000556636 TP53TG3Q9ULZ0 132 aa7.55□□□□□ -1.2
GABRB3-211ENST00000556636 IGHV1OR15-1A0A075B7D0 117 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 A0A1W2PRE2 83 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 BCL2L11O43521 198 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 IGLV2-11P01706 119 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 TCRAP04437 139 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 SEC11BP0C7V7 166 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 HTN3P15516 51 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 FGF8P55075 233 aaPredicted RBP7.54□□□□□ -1.2
GABRB3-211ENST00000556636 LGALSLQ3ZCW2 172 aaPredicted RBP7.54□□□□□ -1.2
GABRB3-211ENST00000556636 AKR1C8PQ5T2L2 129 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 TMUB2Q71RG4 321 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 TCTE3Q8IZS6 198 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 SGK494Q96LW2 274 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 NDUFAF3Q9BU61 184 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 GSN-AS1Q9NRJ2 163 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 EPDR1Q9UM22 224 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 RPH3ALQ9UNE2 315 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 KLF12Q9Y4X4 402 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 DNAH10Q8IVF4 4471 aa7.54□□□□□ -1.2
GABRB3-211ENST00000556636 TMEM88Q6PEY1 159 aa7.53□□□□□ -1.2
GABRB3-211ENST00000556636 Q6ZTI0 123 aa7.53□□□□□ -1.2
GABRB3-211ENST00000556636 ZNF471Q9BX82 626 aaPredicted RBP7.53□□□□□ -1.2
GABRB3-211ENST00000556636 EPPK1P58107 5090 aaKnown RBP7.53□□□□□ -1.2
GABRB3-211ENST00000556636 DNAH6Q9C0G6 4158 aa7.53□□□□□ -1.2
GABRB3-211ENST00000556636 SERTM2A0A1B0GWG4 89 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 KANTRA0A1W2PQU2 76 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 GAGE12BA1L429 117 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 FAM74A7A6NL05 159 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 SNURFLB1AK76 121 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 GAGE7O76087 117 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 ATP5G1P05496 136 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 GAGE12FP0CL80 117 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 GAGE12GP0CL81 117 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 GAGE12IP0CL82 117 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 ATP5G3P48201 142 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 TCL1AP56279 114 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 IBA57Q5T440 356 aaKnown RBP7.52□□□□□ -1.21
GABRB3-211ENST00000556636 ZNF680Q8NEM1 530 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 MBD3L1Q8WWY6 194 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 LINC00479Q96M42 142 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 C18orf15Q96N68 181 aa7.52□□□□□ -1.21
GABRB3-211ENST00000556636 MAP1LC3B2A6NCE7 125 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 F5H768 121 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 RGS13O14921 159 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 SPINK4O60575 86 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 HOXA5P20719 270 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 ZNF80P51504 273 aaPredicted RBP7.51□□□□□ -1.21
GABRB3-211ENST00000556636 UBE2G2P60604 165 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 TDRG1Q3Y452 100 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 IQCF2Q8IXL9 164 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 C8orf49Q96NF6 230 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 MAP1LC3BQ9GZQ8 125 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 TREM1Q9NP99 234 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 MDFICQ9P1T7 246 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 PSG8Q9UQ74 426 aa7.51□□□□□ -1.21
GABRB3-211ENST00000556636 TRAV34A0A0B4J273 112 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 UMAD1C9J7I0 102 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 F6UZH7 168 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 GNRH2O43555 120 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 C1QBP02746 253 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 P0DMU3 169 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 FAM231AP0DMU4 169 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 FAM231CP0DMU5 169 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 FLI1Q01543 452 aaPredicted RBP7.5□□□□□ -1.21
GABRB3-211ENST00000556636 POM121L12Q8N7R1 296 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 CYB561D1Q8N8Q1 229 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 STOML3Q8TAV4 291 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 ATG101Q9BSB4 218 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 C11orf21Q9P2W6 132 aa7.5□□□□□ -1.21
GABRB3-211ENST00000556636 DNAH2Q9P225 4427 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 TRAV21A0A0B4J279 112 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 EIF5AP63241 154 aaKnown RBP7.49□□□□□ -1.21
GABRB3-211ENST00000556636 LGALS9BQ3B8N2 356 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 FAM159AQ6UWV7 190 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 PRNTQ86SH4 94 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 TMEM75Q8N9X5 138 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 FAM213BQ8TBF2 198 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 SFT2D1Q8WV19 159 aa7.49□□□□□ -1.21
GABRB3-211ENST00000556636 NKX6-2Q9C056 277 aaPredicted RBP7.49□□□□□ -1.21
GABRB3-211ENST00000556636 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 TRGV1A0A0A0MS02 117 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 IGHV3-16A0A0C4DH30 117 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 A0A1B0GVG6 124 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 FBLL1A6NHQ2 334 aaKnown RBP7.48□□□□□ -1.21
GABRB3-211ENST00000556636 K7EQM0 130 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 PFDN1O60925 122 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 IFNA7P01567 189 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 TPT1P13693 172 aaKnown RBP7.48□□□□□ -1.21
GABRB3-211ENST00000556636 OR5I1Q13606 314 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 DPPA3Q6W0C5 159 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 TMEM183AQ8IXX5 376 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 C15orf53Q8NAA6 179 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 HIST1H2BAQ96A08 127 aa7.48□□□□□ -1.21
GABRB3-211ENST00000556636 TRAV26-1A0A087WT03 109 aa7.47□□□□□ -1.21
GABRB3-211ENST00000556636 PEX7O00628 323 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms