RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 BAGE2Q86Y30 109 aa8.22□□□□□ -1.09
FOXN3-212ENST00000556541 Q8TAT8 98 aa8.22□□□□□ -1.09
FOXN3-212ENST00000556541 MRAPQ8TCY5 172 aa8.22□□□□□ -1.09
FOXN3-212ENST00000556541 ASCL2Q99929 193 aa8.22□□□□□ -1.09
FOXN3-212ENST00000556541 B9D2Q9BPU9 175 aa8.22□□□□□ -1.09
FOXN3-212ENST00000556541 DERL1Q9BUN8 251 aa8.22□□□□□ -1.09
FOXN3-212ENST00000556541 TRBV20OR9-2A0A075B6H5 130 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 TRAV21A0A0B4J279 112 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 SMIM9A6NGZ8 99 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 ZNF324O75467 553 aaPredicted RBP8.21□□□□□ -1.1
FOXN3-212ENST00000556541 IGLV2-8P01709 118 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 GPX1P07203 203 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 PFN1P07737 140 aaKnown RBP8.21□□□□□ -1.1
FOXN3-212ENST00000556541 ZNF674Q2M3X9 581 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 TDRG1Q3Y452 100 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 SOHLH1Q5JUK2 328 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 GFI1BQ5VTD9 330 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 RNF183Q96D59 192 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 SMIM7Q9BQ49 75 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 TM2D3Q9BRN9 247 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 GOLT1BQ9Y3E0 138 aa8.21□□□□□ -1.1
FOXN3-212ENST00000556541 ZNF727A8MUV8 499 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 H7BYZ3 331 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 M0R2Z0 102 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 IGKV3-20P01619 116 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 PRB2P02812 416 aaPredicted RBP8.2□□□□□ -1.1
FOXN3-212ENST00000556541 DEFA6Q01524 100 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 NIPSNAP3BQ9BS92 247 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 TP53TG3Q9ULZ0 132 aa8.2□□□□□ -1.1
FOXN3-212ENST00000556541 TMEM218A2RU14 115 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 FABP5P3A8MUU1 101 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 GCGP01275 180 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 CXCL1P09341 107 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 SFTA3P0C7M3 94 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 NHLRC4P0CG21 123 aaPredicted RBP8.19□□□□□ -1.1
FOXN3-212ENST00000556541 PNRC1Q12796 327 aaPredicted RBP8.19□□□□□ -1.1
FOXN3-212ENST00000556541 C10orf91Q5T1B1 145 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 FAM162BQ5T6X4 162 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 PRR9Q5T870 116 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 C1orf158Q8N1D5 194 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 ZC2HC1AQ96GY0 325 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 SGK494Q96LW2 274 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 C8orf49Q96NF6 230 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 RCHY1Q96PM5 261 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 SPATA25Q9BR10 227 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 SEC11CQ9BY50 192 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 XCL2Q9UBD3 114 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 NAT8Q9UHE5 227 aa8.19□□□□□ -1.1
FOXN3-212ENST00000556541 BTN1A1Q13410 526 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 TMEM241Q24JQ0 296 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 ANXA2RQ3ZCQ2 193 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 DEFB121Q5J5C9 76 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 DNLZQ5SXM8 178 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 DMRTA1Q5VZB9 504 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 FAM231DQ6ZW35 169 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 LINC01551Q86U37 167 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 OCC1Q8TAD7 63 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 KCNS1Q96KK3 526 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 SDF2L1Q9HCN8 221 aa8.18□□□□□ -1.1
FOXN3-212ENST00000556541 PRKDCP78527 4128 aaKnown RBP8.18□□□□□ -1.1
FOXN3-212ENST00000556541 TRAV12-2A0A075B6T6 113 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 C19orf71A6NCJ1 209 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 SPRY2O43597 315 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 RBMY1A1P0DJD3 496 aaKnown RBP8.17□□□□□ -1.1
FOXN3-212ENST00000556541 RBMY1CP0DJD4 496 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 PRB4P10163 310 aaPredicted RBP8.17□□□□□ -1.1
FOXN3-212ENST00000556541 MIFP14174 115 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 RNASE4P34096 147 aaKnown RBP8.17□□□□□ -1.1
FOXN3-212ENST00000556541 CRIP1P50238 77 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 ZNF80P51504 273 aaPredicted RBP8.17□□□□□ -1.1
FOXN3-212ENST00000556541 KIR3DS1Q14943 382 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 RBMY1FQ15415 496 aaKnown RBP8.17□□□□□ -1.1
FOXN3-212ENST00000556541 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 ZNF493Q6ZR52 646 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 SBSPONQ8IVN8 264 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 OVOL2Q9BRP0 275 aa8.17□□□□□ -1.1
FOXN3-212ENST00000556541 CARHSP1Q9Y2V2 147 aaKnown RBP8.17□□□□□ -1.1
FOXN3-212ENST00000556541 IGHV1OR15-1A0A075B7D0 117 aa8.16□□□□□ -1.1
FOXN3-212ENST00000556541 TRAV12-3A0A0B4J271 114 aa8.16□□□□□ -1.1
FOXN3-212ENST00000556541 KRBOX1C9JBD0 128 aa8.16□□□□□ -1.1
FOXN3-212ENST00000556541 FXYD7P58549 80 aa8.16□□□□□ -1.1
FOXN3-212ENST00000556541 DEFB135Q30KP9 77 aa8.16□□□□□ -1.1
FOXN3-212ENST00000556541 CT83Q5H943 113 aa8.16□□□□□ -1.1
FOXN3-212ENST00000556541 IBA57Q5T440 356 aaKnown RBP8.16□□□□□ -1.1
FOXN3-212ENST00000556541 X6R8D5 127 aa8.16□□□□□ -1.1
FOXN3-212ENST00000556541 TMEM189A5PLL7 270 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 K7EN84 100 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 SH2D1AO60880 128 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 CEBPGP53567 150 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 RPL23P62829 140 aaKnown RBP8.15□□□□□ -1.1
FOXN3-212ENST00000556541 FAM159AQ6UWV7 190 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 TMEM263Q8WUH6 116 aaKnown RBP8.15□□□□□ -1.1
FOXN3-212ENST00000556541 ISOC2Q96AB3 205 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 C11orf68Q9H3H3 251 aaKnown RBP8.15□□□□□ -1.1
FOXN3-212ENST00000556541 ZMAT4Q9H898 229 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 OSTCQ9NRP0 149 aa8.15□□□□□ -1.1
FOXN3-212ENST00000556541 TRGV11A0A075B6L2 103 aa8.14□□□□□ -1.11
FOXN3-212ENST00000556541 B4DEV8 164 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms