RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 A0A1W2PRE2 83 aa12.17□□□□□ -0.46
PSEN1-217ENST00000556533 PLAC8L1A1L4L8 177 aa12.17□□□□□ -0.46
PSEN1-217ENST00000556533 LYRM9A8MSI8 78 aa12.17□□□□□ -0.46
PSEN1-217ENST00000556533 K7EQM0 130 aa12.17□□□□□ -0.46
PSEN1-217ENST00000556533 RGS13O14921 159 aa12.17□□□□□ -0.46
PSEN1-217ENST00000556533 TCRAP04437 139 aa12.17□□□□□ -0.46
PSEN1-217ENST00000556533 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
PSEN1-217ENST00000556533 TIMM8BQ9Y5J9 83 aaPredicted RBP12.17□□□□□ -0.46
PSEN1-217ENST00000556533 TRBV7-9A0A0J9YWB2 115 aa12.16□□□□□ -0.46
PSEN1-217ENST00000556533 ZFP69Q49AA0 526 aa12.16□□□□□ -0.46
PSEN1-217ENST00000556533 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
PSEN1-217ENST00000556533 SNURFLB1AK76 121 aa12.15□□□□□ -0.46
PSEN1-217ENST00000556533 LY6G6CO95867 125 aa12.15□□□□□ -0.46
PSEN1-217ENST00000556533 MUC21Q5SSG8 566 aa12.15□□□□□ -0.46
PSEN1-217ENST00000556533 CST9LP1Q5W188 147 aa12.15□□□□□ -0.46
PSEN1-217ENST00000556533 EIF5AL1Q6IS14 154 aaKnown RBP12.15□□□□□ -0.46
PSEN1-217ENST00000556533 EIF4E3Q8N5X7 224 aaKnown RBP12.15□□□□□ -0.46
PSEN1-217ENST00000556533 LENEPQ9Y5L5 61 aa12.15□□□□□ -0.46
PSEN1-217ENST00000556533 DYNC2H1Q8NCM8 4307 aaKnown RBP12.14□□□□□ -0.47
PSEN1-217ENST00000556533 IGHV1OR15-1A0A075B7D0 117 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 SERTM2A0A1B0GWG4 89 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 FAM74A7A6NL05 159 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 F6UZH7 168 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 H2AFB1P0C5Y9 115 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 DPPA3Q6W0C5 159 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 PRNTQ86SH4 94 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 MBD3L1Q8WWY6 194 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 TVP23CQ96ET8 276 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 GSN-AS1Q9NRJ2 163 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 TP53TG3Q9ULZ0 132 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
PSEN1-217ENST00000556533 IGHV4-4A0A075B6R2 117 aa12.13□□□□□ -0.47
PSEN1-217ENST00000556533 TRAV34A0A0B4J273 112 aa12.13□□□□□ -0.47
PSEN1-217ENST00000556533 SLC51BQ86UW2 128 aa12.13□□□□□ -0.47
PSEN1-217ENST00000556533 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
PSEN1-217ENST00000556533 ATG101Q9BSB4 218 aa12.13□□□□□ -0.47
PSEN1-217ENST00000556533 NKX6-2Q9C056 277 aaPredicted RBP12.13□□□□□ -0.47
PSEN1-217ENST00000556533 NAGKQ9UJ70 344 aa12.13□□□□□ -0.47
PSEN1-217ENST00000556533 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 GAGE7O76087 117 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 GAGE12FP0CL80 117 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 GAGE12GP0CL81 117 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 GAGE12IP0CL82 117 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 FLI1Q01543 452 aaPredicted RBP12.12□□□□□ -0.47
PSEN1-217ENST00000556533 PLECQ15149 4684 aaKnown RBP12.12□□□□□ -0.47
PSEN1-217ENST00000556533 C9orf62Q8N4C0 152 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 ZNF680Q8NEM1 530 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 LINC00467Q9BRT7 94 aa12.12□□□□□ -0.47
PSEN1-217ENST00000556533 PEX7O00628 323 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 PAGE4O60829 102 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 ANXA2RQ3ZCQ2 193 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 FAM159AQ6UWV7 190 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 LINC00476Q8WZB0 136 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 C8orf49Q96NF6 230 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 APLNQ9ULZ1 77 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 KLF12Q9Y4X4 402 aa12.11□□□□□ -0.47
PSEN1-217ENST00000556533 F5H768 121 aa12.1□□□□□ -0.47
PSEN1-217ENST00000556533 PPT1P50897 306 aa12.1□□□□□ -0.47
PSEN1-217ENST00000556533 TCTAP57738 103 aa12.1□□□□□ -0.47
PSEN1-217ENST00000556533 Q6AWC8 147 aa12.1□□□□□ -0.47
PSEN1-217ENST00000556533 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
PSEN1-217ENST00000556533 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
PSEN1-217ENST00000556533 RYR3Q15413 4870 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 TRAV21A0A0B4J279 112 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 ATP5G1P05496 136 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 ATP5G3P48201 142 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 RAB5CP51148 216 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 NKX2-5P52952 324 aaPredicted RBP12.09□□□□□ -0.47
PSEN1-217ENST00000556533 TMEM183BQ1AE95 376 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 Q6ZTI0 123 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 TMEM183AQ8IXX5 376 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 HIST1H2BAQ96A08 127 aa12.09□□□□□ -0.47
PSEN1-217ENST00000556533 TRGV1A0A0A0MS02 117 aa12.08□□□□□ -0.48
PSEN1-217ENST00000556533 FBLL1A6NHQ2 334 aaKnown RBP12.08□□□□□ -0.48
PSEN1-217ENST00000556533 GCGP01275 180 aa12.08□□□□□ -0.48
PSEN1-217ENST00000556533 CCL20P78556 96 aa12.08□□□□□ -0.48
PSEN1-217ENST00000556533 DAZ2Q13117 558 aaKnown RBP12.08□□□□□ -0.48
PSEN1-217ENST00000556533 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
PSEN1-217ENST00000556533 SAPCD1Q5SSQ6 148 aa12.08□□□□□ -0.48
PSEN1-217ENST00000556533 TRGV2A0A075B6R0 118 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 GNRH2O43555 120 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 SULT1A2P50226 295 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 ZNF80P51504 273 aaPredicted RBP12.07□□□□□ -0.48
PSEN1-217ENST00000556533 TCL1AP56279 114 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 TMEM88Q6PEY1 159 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 GNG13Q9P2W3 67 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
PSEN1-217ENST00000556533 RYR2Q92736 4967 aa12.06□□□□□ -0.48
PSEN1-217ENST00000556533 TRGV11A0A075B6L2 103 aa12.06□□□□□ -0.48
PSEN1-217ENST00000556533 TEX46H3BTG2 121 aa12.06□□□□□ -0.48
PSEN1-217ENST00000556533 UBE2G1P62253 170 aa12.06□□□□□ -0.48
PSEN1-217ENST00000556533 OR5I1Q13606 314 aa12.06□□□□□ -0.48
PSEN1-217ENST00000556533 IBA57Q5T440 356 aaKnown RBP12.06□□□□□ -0.48
PSEN1-217ENST00000556533 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms