RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 A0A1W2PS18 150 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF320A2RRD8 509 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF705GA8MUZ8 300 aaPredicted RBP5.2□□□□□ -1.58
SLIRP-204ENST00000555890 BUB3O43684 328 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 GATCO43716 136 aaKnown RBP5.2□□□□□ -1.58
SLIRP-204ENST00000555890 IGLV2-8P01709 118 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV3-11P01762 117 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 TYMSP04818 313 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 RBMY1A1P0DJD3 496 aaKnown RBP5.2□□□□□ -1.58
SLIRP-204ENST00000555890 FOXE3Q13461 319 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 ANXA2RQ3ZCQ2 193 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 FAM106AQ4KMX7 169 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 PET117Q6UWS5 81 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 GOLT1AQ6ZVE7 132 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 TMEM183AQ8IXX5 376 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 ZFP82Q8N141 532 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 TMEM75Q8N9X5 138 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 DAZAP1Q96EP5 407 aaKnown RBP5.2□□□□□ -1.58
SLIRP-204ENST00000555890 C17orf77Q96MU5 243 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 CITED2Q99967 270 aaPredicted RBP5.2□□□□□ -1.58
SLIRP-204ENST00000555890 SLC50A1Q9BRV3 221 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 KLK15Q9H2R5 256 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 CLEC5AQ9NY25 188 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 PEF1Q9UBV8 284 aaKnown RBP5.2□□□□□ -1.58
SLIRP-204ENST00000555890 ZFP30Q9Y2G7 519 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 V9GYV3 84 aa5.2□□□□□ -1.58
SLIRP-204ENST00000555890 CLPSL1A2RUU4 121 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 CBY3A6NI87 242 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 SLC17A3O00476 420 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF207O43670 478 aaKnown RBP5.19□□□□□ -1.58
SLIRP-204ENST00000555890 LTAP01374 205 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 PSMB8P28062 276 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 BMI1P35226 326 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 PSG3Q16557 428 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 COX19Q49B96 90 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 SAPCD1Q5SSQ6 148 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 PRNTQ86SH4 94 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 Q86TA4 180 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 NHLRC2Q8NBF2 726 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 RNASE7Q9H1E1 156 aaKnown RBP5.19□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF702PQ9H963 129 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF492Q9P255 531 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 PSG8Q9UQ74 426 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 SMAD5-AS1Q9Y6J3 95 aa5.19□□□□□ -1.58
SLIRP-204ENST00000555890 K7EMT4 169 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 TRGC2P03986 189 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 PRR27Q6MZM9 219 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 GPHB5Q86YW7 130 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 Q8N2B8 174 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 OR4B1Q8NGF8 309 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 SGK494Q96LW2 274 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 NDFIP1Q9BT67 221 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 MLST8Q9BVC4 326 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 SAV1Q9H4B6 383 aaPredicted RBP5.18□□□□□ -1.58
SLIRP-204ENST00000555890 ZNF331Q9NQX6 463 aaPredicted RBP5.18□□□□□ -1.58
SLIRP-204ENST00000555890 UFC1Q9Y3C8 167 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 TRAPPC1Q9Y5R8 145 aa5.18□□□□□ -1.58
SLIRP-204ENST00000555890 PLECQ15149 4684 aaKnown RBP5.18□□□□□ -1.58
SLIRP-204ENST00000555890 STARD9Q9P2P6 4700 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV3OR16-13A0A075B7E8 117 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV3-49A0A0A0MS15 119 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV3-74A0A0B4J1X5 117 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV3-66A0A0C4DH42 116 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 IGHV7-4-1A0A0J9YVY3 117 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 SMIM27A0A1W2PRY6 76 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 RBAKDNA6NC62 111 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 IZUMO1RA6ND01 250 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 A8MWL6 223 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 M0R3E3 92 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 CHEK1O14757 476 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 IGLV2-11P01706 119 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 TRBV12-3P01733 135 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 P01737 135 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 APOHP02749 345 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-204ENST00000555890 LGALS1P09382 135 aaKnown RBP5.17□□□□□ -1.58
SLIRP-204ENST00000555890 CT45A10P0DMU9 189 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 EDN2P20800 178 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 NDUFA6P56556 154 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 SNRPEP62304 92 aaKnown RBP5.17□□□□□ -1.58
SLIRP-204ENST00000555890 SAMD13Q5VXD3 122 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 LCN12Q6JVE5 192 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 WDR73Q6P4I2 378 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 LCNL1Q6ZST4 164 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 GBGT1Q8N5D6 347 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 MRPL53Q96EL3 112 aaKnown RBP5.17□□□□□ -1.58
SLIRP-204ENST00000555890 UBE2E2Q96LR5 201 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 KRTAP9-8Q9BYQ0 159 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 RPP21Q9H633 154 aaKnown RBP5.17□□□□□ -1.58
SLIRP-204ENST00000555890 DAZ1Q9NQZ3 744 aaKnown RBP5.17□□□□□ -1.58
SLIRP-204ENST00000555890 NAT8BQ9UHF3 227 aa5.17□□□□□ -1.58
SLIRP-204ENST00000555890 MUC4Q99102 2169 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 TRAV8-1A0A0A6YYK1 113 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 C19orf71A6NCJ1 209 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 C5orf52A6NGY3 159 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 DNAJC9-AS1A6NH13 148 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BKO60814 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 MT-ND6P03923 174 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 HIST1H2BJP06899 126 aa5.16□□□□□ -1.58
SLIRP-204ENST00000555890 TRGC1P0CF51 173 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms