RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 SERF2P84101 59 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 OR5I1Q13606 314 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 PRR9Q5T870 116 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 C1orf134Q5TEV5 83 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 Q6AWC8 147 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 OR10G4Q8NGN3 311 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 OR10G9Q8NGN4 311 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 OR10G7Q8NGN6 311 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 KLF12Q9Y4X4 402 aa8.25□□□□□ -1.09
VRK1-204ENST00000555351 NBDYA0A0U1RRE5 68 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 SERTM2A0A1B0GWG4 89 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 BTF3P20290 206 aaKnown RBP8.24□□□□□ -1.09
VRK1-204ENST00000555351 SLAQ13239 276 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 TDRG1Q3Y452 100 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 CMTM2Q8TAZ6 248 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 SUN5Q8TC36 379 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 ARPC5LQ9BPX5 153 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 UPK3BQ9BT76 320 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 TMPRSS5Q9H3S3 457 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 LINC00588Q9Y4M8 146 aa8.24□□□□□ -1.09
VRK1-204ENST00000555351 TRGV1A0A0A0MS02 117 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 PGPA6NDG6 321 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 STAG3L2P0CL84 134 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 RAB2AP61019 212 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 ZNF415Q09FC8 603 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 SSX7Q7RTT5 188 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 Q8TAT8 98 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 ST6GAL2Q96JF0 529 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 SPXQ9BT56 116 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 TNFSF18Q9UNG2 199 aa8.23□□□□□ -1.09
VRK1-204ENST00000555351 DNAH2Q9P225 4427 aa8.22□□□□□ -1.09
VRK1-204ENST00000555351 A0A1W2PPQ1 181 aa8.22□□□□□ -1.09
VRK1-204ENST00000555351 CDC34P49427 236 aaPredicted RBP8.22□□□□□ -1.09
VRK1-204ENST00000555351 TTC32Q5I0X7 151 aa8.22□□□□□ -1.09
VRK1-204ENST00000555351 FAM159AQ6UWV7 190 aa8.22□□□□□ -1.09
VRK1-204ENST00000555351 INO80EQ8NBZ0 244 aaPredicted RBP8.22□□□□□ -1.09
VRK1-204ENST00000555351 MRPS16Q9Y3D3 137 aaKnown RBP8.22□□□□□ -1.09
VRK1-204ENST00000555351 TRGV11A0A075B6L2 103 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 FBLL1A6NHQ2 334 aaKnown RBP8.21□□□□□ -1.1
VRK1-204ENST00000555351 ARL14EPLP0DKL9 152 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 ATP6V0CP27449 155 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 IQCF2Q8IXL9 164 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 C5orf17Q8NAS9 161 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 HSD17B11Q8NBQ5 300 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 VSIG2Q96IQ7 327 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 HYLS1Q96M11 299 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 Q9H8V8 135 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 PRO0255Q9UI72 69 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 FAT2Q9NYQ8 4349 aa8.21□□□□□ -1.1
VRK1-204ENST00000555351 BORCS7-ASMTA0A0B4J1R7 106 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 A0A0J9YY99 117 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 ESRGQ1W209 222 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 RGS21Q2M5E4 152 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 GOLT1AQ6ZVE7 132 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 C6orf223Q8N319 242 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 RASL10AQ92737 203 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 RAB24Q969Q5 203 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 KCNS1Q96KK3 526 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 TMEM167BQ9NRX6 74 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 DNAH17Q9UFH2 4485 aa8.2□□□□□ -1.1
VRK1-204ENST00000555351 A0A096LPF7 62 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 RNF222A6NCQ9 220 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 K7EQM0 130 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 CXorf1O96002 111 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 GCHFRP30047 84 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 Q6ZQT7 251 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 NDFIP1Q9BT67 221 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 ACTR3CQ9C0K3 210 aaPredicted RBP8.19□□□□□ -1.1
VRK1-204ENST00000555351 TREM1Q9NP99 234 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 ICOSQ9Y6W8 199 aa8.19□□□□□ -1.1
VRK1-204ENST00000555351 TAAR5O14804 337 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 PAX4O43316 350 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 TCRAP04437 139 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 MED14OSP0DP75 135 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 CRYBA4P53673 196 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 FHL2Q14192 279 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 Q5BKY6 102 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 MUC21Q5SSG8 566 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 OR2T35Q8NGX2 323 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 MRPL16Q9NX20 251 aaKnown RBP8.18□□□□□ -1.1
VRK1-204ENST00000555351 MDFICQ9P1T7 246 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 HHLA3Q9XRX5 114 aa8.18□□□□□ -1.1
VRK1-204ENST00000555351 MUC4Q99102 2169 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 A0A1W2PRE2 83 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 HMGB3O15347 200 aaKnown RBP8.17□□□□□ -1.1
VRK1-204ENST00000555351 EIF3GO75821 320 aaKnown RBP eCLIP8.17□□□□□ -1.1
VRK1-204ENST00000555351 MRPL23Q16540 153 aaKnown RBP8.17□□□□□ -1.1
VRK1-204ENST00000555351 TMEM183BQ1AE95 376 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
VRK1-204ENST00000555351 TMEM183AQ8IXX5 376 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 TVP23CQ96ET8 276 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 SH3BGRL3Q9H299 93 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 EPDR1Q9UM22 224 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 RPH3ALQ9UNE2 315 aa8.17□□□□□ -1.1
VRK1-204ENST00000555351 FXYD6-FXYD2A0A087WZ82 144 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 TRAV8-1A0A0A6YYK1 113 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 IGHV3-16A0A0C4DH30 117 aa8.16□□□□□ -1.1
VRK1-204ENST00000555351 CTXND1A0A1B0GTU2 59 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms