RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 MIXL1Q9H2W2 232 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 MCUBQ9NWR8 336 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 MGAT4CQ9UBM8 478 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
SCFD1-215ENST00000555259 IGKV2-40A0A087WW87 121 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-215ENST00000555259 FABP12A6NFH5 140 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 NDUFB4O95168 129 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 IGKV2D-40P01614 121 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-215ENST00000555259 HOXB5P09067 269 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 VAMP1P23763 118 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 ID3Q02535 119 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 TMEM14EPQ6UXP3 125 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 DAZ4Q86SG3 579 aaKnown RBP6.24□□□□□ -1.41
SCFD1-215ENST00000555259 MGST2Q99735 147 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 DAZ3Q9NR90 486 aaKnown RBP6.24□□□□□ -1.41
SCFD1-215ENST00000555259 ZNF492Q9P255 531 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 PRELID1Q9Y255 219 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 MUC2Q02817 5179 aa6.24□□□□□ -1.41
SCFD1-215ENST00000555259 CTDSPLO15194 276 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 TMEM183BQ1AE95 376 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 TOR2AQ5JU69 321 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 TMEM183AQ8IXX5 376 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 EXOC3-AS1Q8N2X6 119 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 SLC25A29Q8N8R3 303 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 VCX3AQ9NNX9 186 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 RPH3ALQ9UNE2 315 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 LPAP08519 4548 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 SSSCA1O60232 199 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 HIST1H1EP10412 219 aaKnown RBP6.23□□□□□ -1.41
SCFD1-215ENST00000555259 UBE2MP61081 183 aaKnown RBP6.23□□□□□ -1.41
SCFD1-215ENST00000555259 Q8TAT8 98 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 SMIM8Q96KF7 97 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 SOSTQ9BQB4 213 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 GTSF1LQ9H1H1 148 aa6.23□□□□□ -1.41
SCFD1-215ENST00000555259 TRGV11A0A075B6L2 103 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 TRBV7-9A0A0J9YWB2 115 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 GGTLC3B5MD39 225 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 M0R2P5 195 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 RGS5O15539 181 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 ARL16Q0P5N6 197 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 PDE6HQ13956 83 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 ODF1Q14990 250 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 BAK1Q16611 211 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 Q6ZRG5 221 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 PRADC1Q9BSG0 188 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 TIMM9Q9Y5J7 89 aa6.22□□□□□ -1.41
SCFD1-215ENST00000555259 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 SFT2D2O95562 160 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 ZNF138P52744 262 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 PPP1R1AQ13522 171 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 IL18Q14116 193 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 ZNF266Q14584 549 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 RHOHQ15669 191 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 VWC2Q2TAL6 325 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 FAM122CQ6P4D5 195 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 FAM159AQ6UWV7 190 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 OR1L4Q8NGR5 311 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 RMI2Q96E14 147 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 DNAJC30Q96LL9 226 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 GGACTQ9BVM4 153 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 AAMDCQ9H7C9 122 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.42
SCFD1-215ENST00000555259 A0A087WXM4 84 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 TRAV8-1A0A0A6YYK1 113 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 TRBV6-4A0A1B0GX49 114 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 FBLL1A6NHQ2 334 aaKnown RBP6.2□□□□□ -1.42
SCFD1-215ENST00000555259 CTDSP2O14595 271 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 PYYP10082 97 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 CAMLGP49069 296 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 MIC13Q5XKP0 118 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 PFDN5Q99471 154 aa6.2□□□□□ -1.42
SCFD1-215ENST00000555259 TSC22D2O75157 780 aa6.19□□□□□ -1.42
SCFD1-215ENST00000555259 CTF1Q16619 201 aa6.19□□□□□ -1.42
SCFD1-215ENST00000555259 Q6AWC8 147 aa6.19□□□□□ -1.42
SCFD1-215ENST00000555259 NRARPQ7Z6K4 114 aa6.19□□□□□ -1.42
SCFD1-215ENST00000555259 C12orf45Q8N5I9 185 aaPredicted RBP6.19□□□□□ -1.42
SCFD1-215ENST00000555259 NAGKQ9UJ70 344 aa6.19□□□□□ -1.42
SCFD1-215ENST00000555259 A0A0D9SG52 128 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 GNRH2O43555 120 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 RAB31Q13636 194 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 DIRAS2Q96HU8 199 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 NAA50Q9GZZ1 169 aaKnown RBP6.18□□□□□ -1.42
SCFD1-215ENST00000555259 DPH3P1Q9H4G8 78 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-215ENST00000555259 IGHV3-73A0A0B4J1V6 119 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 C5orf51A6NDU8 294 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 PANO1I0J062 215 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 OR10J4P0C629 311 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 TAS2R30P59541 319 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 C14orf177Q52M58 125 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 FFAR4Q5NUL3 377 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 CFAP126Q5VTH2 177 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 HSD17B11Q8NBQ5 300 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 SH3BGRL3Q9H299 93 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 OR51M1Q9H341 326 aa6.18□□□□□ -1.42
SCFD1-215ENST00000555259 GPN1Q9HCN4 374 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-215ENST00000555259 RABL2AQ9UBK7 228 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-215ENST00000555259 CIDEAO60543 219 aa6.17□□□□□ -1.42
SCFD1-215ENST00000555259 SCGB1D2O95969 90 aa6.17□□□□□ -1.42
SCFD1-215ENST00000555259 LINC01600Q96MT4 127 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms