RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZFP30Q9Y2G7 519 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 HLA-DRB4X5D2U9 266 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 TENM3Q9P273 2699 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 CA1P00915 261 aaPredicted RBP7.93□□□□□ -1.14
TDP1-211ENST00000555178 BTN1A1Q13410 526 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 SPINK13Q1W4C9 94 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 AMTNQ6UX39 209 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 SFRP2Q96HF1 295 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 LY96Q9Y6Y9 160 aa7.93□□□□□ -1.14
TDP1-211ENST00000555178 ERVFC1-1P60608 527 aa7.92□□□□□ -1.14
TDP1-211ENST00000555178 RPL19P84098 196 aaKnown RBP7.92□□□□□ -1.14
TDP1-211ENST00000555178 TMEM88Q6PEY1 159 aa7.92□□□□□ -1.14
TDP1-211ENST00000555178 CBLN2Q8IUK8 224 aa7.92□□□□□ -1.14
TDP1-211ENST00000555178 LINC00477Q96M19 166 aa7.92□□□□□ -1.14
TDP1-211ENST00000555178 COL7A1Q02388 2944 aa7.92□□□□□ -1.14
TDP1-211ENST00000555178 NDFIP1Q9BT67 221 aa7.91□□□□□ -1.14
TDP1-211ENST00000555178 SH2D1AO60880 128 aa7.91□□□□□ -1.14
TDP1-211ENST00000555178 RPL35AP18077 110 aaKnown RBP7.91□□□□□ -1.14
TDP1-211ENST00000555178 SMUG1Q53HV7 270 aa7.91□□□□□ -1.14
TDP1-211ENST00000555178 SAPCD1Q5SSQ6 148 aa7.91□□□□□ -1.14
TDP1-211ENST00000555178 IBA57Q5T440 356 aaKnown RBP7.91□□□□□ -1.14
TDP1-211ENST00000555178 NUDT10Q8NFP7 164 aa7.91□□□□□ -1.14
TDP1-211ENST00000555178 NUDT11Q96G61 164 aa7.91□□□□□ -1.14
TDP1-211ENST00000555178 C11orf21Q9P2W6 132 aa7.91□□□□□ -1.14
TDP1-211ENST00000555178 C19orf71A6NCJ1 209 aa7.9□□□□□ -1.14
TDP1-211ENST00000555178 RNASE4P34096 147 aaKnown RBP7.9□□□□□ -1.14
TDP1-211ENST00000555178 RHEBQ15382 184 aa7.9□□□□□ -1.14
TDP1-211ENST00000555178 GTSCR1Q86UQ5 136 aa7.9□□□□□ -1.14
TDP1-211ENST00000555178 STHQ8IWL8 128 aa7.9□□□□□ -1.14
TDP1-211ENST00000555178 SMIM12Q96EX1 92 aa7.9□□□□□ -1.14
TDP1-211ENST00000555178 PPP1R14DQ9NXH3 145 aa7.9□□□□□ -1.14
TDP1-211ENST00000555178 TMSB15BA0A087X1C1 80 aa7.9□□□□□ -1.15
TDP1-211ENST00000555178 FBLL1A6NHQ2 334 aaKnown RBP7.9□□□□□ -1.15
TDP1-211ENST00000555178 DUSP14O95147 198 aaKnown RBP7.9□□□□□ -1.15
TDP1-211ENST00000555178 GPX1P07203 203 aa7.9□□□□□ -1.15
TDP1-211ENST00000555178 GIG44P09565 113 aaPredicted RBP7.9□□□□□ -1.15
TDP1-211ENST00000555178 RBMY1A1P0DJD3 496 aaKnown RBP7.9□□□□□ -1.15
TDP1-211ENST00000555178 RBMY1CP0DJD4 496 aa7.9□□□□□ -1.15
TDP1-211ENST00000555178 RBMY1FQ15415 496 aaKnown RBP7.9□□□□□ -1.15
TDP1-211ENST00000555178 GFI1BQ5VTD9 330 aa7.9□□□□□ -1.15
TDP1-211ENST00000555178 COX8CQ7Z4L0 72 aa7.9□□□□□ -1.15
TDP1-211ENST00000555178 TRPT1Q86TN4 253 aaKnown RBP7.9□□□□□ -1.15
TDP1-211ENST00000555178 V9GYV3 84 aa7.9□□□□□ -1.15
TDP1-211ENST00000555178 A8MTW9 85 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 KLLNB2CW77 178 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 K7EIL1 84 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 GZMBP10144 247 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 CRISP2P16562 243 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 FAM162BQ5T6X4 162 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 KPRPQ5T749 579 aaPredicted RBP7.89□□□□□ -1.15
TDP1-211ENST00000555178 OR10G8Q8NGN5 311 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 SRD5A3Q9H8P0 318 aa7.89□□□□□ -1.15
TDP1-211ENST00000555178 TRAV12-3A0A0B4J271 114 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 ZNF705GA8MUZ8 300 aaPredicted RBP7.88□□□□□ -1.15
TDP1-211ENST00000555178 CRXO43186 299 aaPredicted RBP7.88□□□□□ -1.15
TDP1-211ENST00000555178 PRM2P04554 102 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 FAM110AQ9BQ89 295 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 LENEPQ9Y5L5 61 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 URGCP-MRPS24S4R325 110 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 PRKDCP78527 4128 aaKnown RBP7.88□□□□□ -1.15
TDP1-211ENST00000555178 B4DEV8 164 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 H7BYZ3 331 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 P01737 135 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 MT-ND4LP03901 98 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 PFN1P07737 140 aaKnown RBP7.88□□□□□ -1.15
TDP1-211ENST00000555178 IGHV4-30-4P0DP06 118 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 CDKN1BP46527 198 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 TCL1AP56279 114 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 MUC21Q5SSG8 566 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 ZNF575Q86XF7 245 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 OSTCQ9NRP0 149 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 NAGKQ9UJ70 344 aa7.88□□□□□ -1.15
TDP1-211ENST00000555178 FAM231DQ6ZW35 169 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 ODF3Q96PU9 254 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 RPP21Q9H633 154 aaKnown RBP7.87□□□□□ -1.15
TDP1-211ENST00000555178 XCL2Q9UBD3 114 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 A0A087WWC5 75 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 IGKV3D-20A0A0C4DH25 116 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 GATCO43716 136 aaKnown RBP7.87□□□□□ -1.15
TDP1-211ENST00000555178 LEPP41159 167 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 C15orf54Q8N8G6 183 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 OR2D3Q8NGH3 330 aa7.87□□□□□ -1.15
TDP1-211ENST00000555178 DAZAP1Q96EP5 407 aaKnown RBP7.87□□□□□ -1.15
TDP1-211ENST00000555178 C7orf71A4D174 169 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 ZNF324O75467 553 aaPredicted RBP7.86□□□□□ -1.15
TDP1-211ENST00000555178 ORM1P02763 201 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 FAM3BP58499 235 aaPredicted RBP7.86□□□□□ -1.15
TDP1-211ENST00000555178 ANAPC16Q96DE5 110 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 TRBV7-9A0A0J9YWB2 115 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 GRIFINA4D1Z8 144 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 FABP5P3A8MUU1 101 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 Q6AWC8 147 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 GTSF1Q8WW33 167 aa7.86□□□□□ -1.15
TDP1-211ENST00000555178 SPRY2O43597 315 aa7.85□□□□□ -1.15
TDP1-211ENST00000555178 CMC4P56277 68 aaPredicted RBP7.85□□□□□ -1.15
TDP1-211ENST00000555178 ANXA2RQ3ZCQ2 193 aa7.85□□□□□ -1.15
TDP1-211ENST00000555178 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.85□□□□□ -1.15
TDP1-211ENST00000555178 BIN3Q9NQY0 253 aa7.85□□□□□ -1.15
TDP1-211ENST00000555178 TP53TG3Q9ULZ0 132 aa7.85□□□□□ -1.15
TDP1-211ENST00000555178 TRAV21A0A0B4J279 112 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms