RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 CTRLP40313 264 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 TM4SF20Q53R12 229 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 GATD1Q8NB37 220 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 NUP35Q8NFH5 326 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 GNB1LQ9BYB4 327 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 C16orf95Q9H693 158 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 IGHV4OR15-8A0A075B7B6 117 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 IGHV3OR16-13A0A075B7E8 117 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 A0A087WW49 117 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 IGHV3-74A0A0B4J1X5 117 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
TDP1-210ENST00000554976 SRSF2Q01130 221 aaKnown RBP6.74□□□□□ -1.33
TDP1-210ENST00000554976 RASL11AQ6T310 242 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 ADAMTSL5Q6ZMM2 481 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 DUX5Q96PT3 197 aa6.74□□□□□ -1.33
TDP1-210ENST00000554976 DAZ1Q9NQZ3 744 aaKnown RBP6.74□□□□□ -1.33
TDP1-210ENST00000554976 A0A1B0GV72 72 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 FAM231BA6NCW3 169 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 RNASE1P07998 156 aaKnown RBP6.73□□□□□ -1.33
TDP1-210ENST00000554976 PAFAH1B2P68402 229 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 SLC35B1P78383 322 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 C9orf47Q6ZRZ4 202 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 NAV2Q8IVL1 2488 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 DCANP1Q8TF63 244 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 TP53TG3Q9ULZ0 132 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 MRPS16Q9Y3D3 137 aaKnown RBP6.73□□□□□ -1.33
TDP1-210ENST00000554976 OTOGQ6ZRI0 2925 aa6.73□□□□□ -1.33
TDP1-210ENST00000554976 K7EQM0 130 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 HNRNPA3P51991 378 aaKnown RBP6.72□□□□□ -1.33
TDP1-210ENST00000554976 LINC00310P59036 64 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 ERCC8Q13216 396 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 KLF5Q13887 457 aaPredicted RBP6.72□□□□□ -1.33
TDP1-210ENST00000554976 C4orf3Q8WVX3 66 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 NAT8BQ9UHF3 227 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 ITPR2Q14571 2701 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 CBLN1P23435 193 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 Q6ZWC4 215 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 SMR3AQ99954 134 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 RHPN1-AS1Q9BWJ2 59 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 YAE1D1Q9NRH1 226 aa6.72□□□□□ -1.33
TDP1-210ENST00000554976 FAM181BA6NEQ2 426 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 IGLC3P0DOY3 106 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 ESDP10768 282 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 CSN1S1P47710 185 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 ATP5L2Q7Z4Y8 100 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 APRG1Q8IVJ8 170 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 KLHDC1Q8N7A1 406 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 Q8TAT8 98 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 AGPAT4-IT1Q9H0P7 198 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 UFC1Q9Y3C8 167 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.33
TDP1-210ENST00000554976 HIGD1CA8MV81 97 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 SH2D1AO60880 128 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 P01737 135 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 TCL1AP56279 114 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 FLNAP21333 2647 aaKnown RBP6.71□□□□□ -1.34
TDP1-210ENST00000554976 A0A1W2PS18 150 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 RIPPLY3P57055 190 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 VAMP3Q15836 100 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 SAMD13Q5VXD3 122 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
TDP1-210ENST00000554976 NRN1Q9NPD7 142 aa6.71□□□□□ -1.34
TDP1-210ENST00000554976 LY6G6DO95868 133 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 HOXD3P31249 432 aaPredicted RBP6.7□□□□□ -1.34
TDP1-210ENST00000554976 HILS1P60008 231 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 Q6ZN92 141 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 Q6ZVH6 145 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 NIT1Q86X76 327 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 FHL3Q13643 280 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 COX19Q49B96 90 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 FAM106AQ4KMX7 169 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 TMEM256Q8N2U0 113 aa6.7□□□□□ -1.34
TDP1-210ENST00000554976 A8MWL6 223 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 HAX1O00165 279 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 MT-ND6P03923 174 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 SPATA45Q537H7 98 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 PRR9Q5T870 116 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 IGLC6P0CF74 106 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 CT45A10P0DMU9 189 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 SLAQ13239 276 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 LINC01559Q495D7 138 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 FAM162BQ5T6X4 162 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 RBPMS2Q6ZRY4 209 aaKnown RBP6.69□□□□□ -1.34
TDP1-210ENST00000554976 C11orf21Q9P2W6 132 aa6.69□□□□□ -1.34
TDP1-210ENST00000554976 C2orf70A6NJV1 201 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 SNURFLB1AK76 121 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 G3V4G9 280 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 NUPR1O60356 82 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 MRPL54Q6P161 138 aaKnown RBP6.68□□□□□ -1.34
TDP1-210ENST00000554976 LENEPQ9Y5L5 61 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 CSPG4Q6UVK1 2322 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 SPINK4O60575 86 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 NDUFA7O95182 113 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 HLA-DQA1P01909 254 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 TSPOP30536 169 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 ZNF138P52744 262 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 SLURP1P55000 103 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 Q0VG73 95 aa6.68□□□□□ -1.34
TDP1-210ENST00000554976 ZFAND2AQ8N6M9 145 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms