RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 NIPSNAP3BQ9BS92 247 aa8.77□□□□□ -1.01
SYNE2-214ENST00000554928 TP53TG3Q9ULZ0 132 aa8.77□□□□□ -1.01
SYNE2-214ENST00000554928 DEFB131BA0A096LNP1 70 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 TRAV10A0A0B4J240 114 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 FAM74A7A6NL05 159 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 IGLL5B9A064 214 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 F6UZH7 168 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 IGLV2-11P01706 119 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 TCRAP04437 139 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 C9orf62Q8N4C0 152 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 C5orf17Q8NAS9 161 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 STOML3Q8TAV4 291 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 C16orf74Q96GX8 76 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 LINC00479Q96M42 142 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
SYNE2-214ENST00000554928 EPDR1Q9UM22 224 aa8.76□□□□□ -1.01
SYNE2-214ENST00000554928 KLK5Q9Y337 293 aaPredicted RBP8.76□□□□□ -1.01
SYNE2-214ENST00000554928 TRAV34A0A0B4J273 112 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 A0A1W2PRE2 83 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 DEFB130BP0DP73 79 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 DEFB130AP0DP74 79 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 HTN3P15516 51 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 NKX2-5P52952 324 aaPredicted RBP8.75□□□□□ -1.01
SYNE2-214ENST00000554928 FAM74A1Q5RGS3 127 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 MUC21Q5SSG8 566 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 C11orf72Q8NBR9 251 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 C2CD4CQ8TF44 421 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 TMEM263Q8WUH6 116 aaKnown RBP8.75□□□□□ -1.01
SYNE2-214ENST00000554928 C8orf49Q96NF6 230 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 APLNQ9ULZ1 77 aa8.75□□□□□ -1.01
SYNE2-214ENST00000554928 C11orf94C9JXX5 98 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 NMBP08949 121 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 TPT1P13693 172 aaKnown RBP8.74□□□□□ -1.01
SYNE2-214ENST00000554928 ATP5G3P48201 142 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 ZNF80P51504 273 aaPredicted RBP8.74□□□□□ -1.01
SYNE2-214ENST00000554928 DAD1P61803 113 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 CCL20P78556 96 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 ARL6IP6Q8N6S5 226 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 MBD3L1Q8WWY6 194 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 LINC00476Q8WZB0 136 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 PYGO2Q9BRQ0 406 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 GSN-AS1Q9NRJ2 163 aa8.74□□□□□ -1.01
SYNE2-214ENST00000554928 DNAH6Q9C0G6 4158 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 IGHV4-4A0A075B6R2 117 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 IGHV1OR15-1A0A075B7D0 117 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 TRBV7-9A0A0J9YWB2 115 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 CBY3A6NI87 242 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 LYRM9A8MSI8 78 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 UMAD1C9J7I0 102 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 CCDC28AQ8IWP9 274 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 EIF4E3Q8N5X7 224 aaKnown RBP8.73□□□□□ -1.01
SYNE2-214ENST00000554928 SFT2D1Q8WV19 159 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 LINC00467Q9BRT7 94 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 PSG8Q9UQ74 426 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 KLF12Q9Y4X4 402 aa8.73□□□□□ -1.01
SYNE2-214ENST00000554928 TIMM8BQ9Y5J9 83 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-214ENST00000554928 KMT2AQ03164 3969 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 PAGE4O60829 102 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 EIF5AP63241 154 aaKnown RBP8.72□□□□□ -1.01
SYNE2-214ENST00000554928 ANXA2RQ3ZCQ2 193 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 ZFP69Q49AA0 526 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 Q6AWC8 147 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 Q6ZTI0 123 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 PRNTQ86SH4 94 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 LINC00612Q8N6U2 182 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 CYB561D1Q8N8Q1 229 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 ATG101Q9BSB4 218 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 TREM1Q9NP99 234 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 C11orf21Q9P2W6 132 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 DNAH10Q8IVF4 4471 aa8.72□□□□□ -1.01
SYNE2-214ENST00000554928 TEX48A0A1B0GUV7 120 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 GAGE12BA1L429 117 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 PEX7O00628 323 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 RGS13O14921 159 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 GAGE7O76087 117 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 LY6G6CO95867 125 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 IFNA7P01567 189 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 GAGE12FP0CL80 117 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 GAGE12GP0CL81 117 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 GAGE12IP0CL82 117 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 FLI1Q01543 452 aaPredicted RBP8.71□□□□□ -1.02
SYNE2-214ENST00000554928 SLC51BQ86UW2 128 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 NAGKQ9UJ70 344 aa8.71□□□□□ -1.02
SYNE2-214ENST00000554928 SERTM2A0A1B0GWG4 89 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 SNURFLB1AK76 121 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 GNRH2O43555 120 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 H2AFB1P0C5Y9 115 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 SULT1A2P50226 295 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 CST9LP1Q5W188 147 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 TMEM88Q6PEY1 159 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 DPPA3Q6W0C5 159 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 TMEM75Q8N9X5 138 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 MDFICQ9P1T7 246 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 ARL2-SNX15V9GYD0 113 aa8.7□□□□□ -1.02
SYNE2-214ENST00000554928 TCL1AP56279 114 aa8.69□□□□□ -1.02
SYNE2-214ENST00000554928 DAZ2Q13117 558 aaKnown RBP8.69□□□□□ -1.02
SYNE2-214ENST00000554928 TMEM183BQ1AE95 376 aa8.69□□□□□ -1.02
SYNE2-214ENST00000554928 Q86TA4 180 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms