RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 K7ENP7 123 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 BUB3O43684 328 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 SCGB2A1O75556 95 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 IGKCP01834 107 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 CLEC3BP05452 202 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 CDSNQ15517 529 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 ZFAND3Q9H8U3 227 aa12.79□□□□□ -0.36
XRCC3-209ENST00000554913 HRNRQ86YZ3 2850 aaPredicted RBP12.78□□□□□ -0.36
XRCC3-209ENST00000554913 IGLV2-18A0A075B6J9 118 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 SMIM13P0DJ93 91 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 ECSCRQ19T08 205 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 Q8N9W7 124 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 CHAC1Q9BUX1 264 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 AGPAT4-IT1Q9H0P7 198 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 MSRB2Q9Y3D2 182 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 IGHV3-49A0A0A0MS15 119 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 TRAV26-2A0A0B4J265 109 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 G3V4G9 280 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 K7ERJ3 54 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 EBI3Q14213 229 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 ZC2HC1BQ5TFG8 222 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 SAMD5Q5TGI4 173 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 Q6ZQT7 251 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 NEGR1Q7Z3B1 354 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 Q8N8P6 123 aa12.78□□□□□ -0.36
XRCC3-209ENST00000554913 TMEM8BA6NDV4 472 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 TRBV25-1A0A075B6N4 114 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 CLPSL1A2RUU4 121 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 K7EMI3 77 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 SMIM17P0DL12 118 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 FABP2P12104 132 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 ZFP36P26651 326 aaKnown RBP12.77□□□□□ -0.37
XRCC3-209ENST00000554913 TMEM160Q9NX00 188 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 HIGD1BQ9P298 99 aa12.77□□□□□ -0.37
XRCC3-209ENST00000554913 COL6A6A6NMZ7 2263 aa12.76□□□□□ -0.37
XRCC3-209ENST00000554913 ITPR1Q14643 2758 aa12.76□□□□□ -0.37
XRCC3-209ENST00000554913 OR5A1Q8NGJ0 315 aa12.76□□□□□ -0.37
XRCC3-209ENST00000554913 TRAV40A0A0B4J280 105 aa12.76□□□□□ -0.37
XRCC3-209ENST00000554913 ZNF207O43670 478 aaKnown RBP12.76□□□□□ -0.37
XRCC3-209ENST00000554913 DPM2O94777 84 aa12.76□□□□□ -0.37
XRCC3-209ENST00000554913 RBAKDNA6NC62 111 aa12.75□□□□□ -0.37
XRCC3-209ENST00000554913 CLEC19AQ6UXS0 136 aa12.75□□□□□ -0.37
XRCC3-209ENST00000554913 MRPL35Q9NZE8 188 aaKnown RBP12.75□□□□□ -0.37
XRCC3-209ENST00000554913 TRAV8-2A0A0B4J237 113 aa12.75□□□□□ -0.37
XRCC3-209ENST00000554913 FAM110DQ8TAY7 271 aaPredicted RBP12.75□□□□□ -0.37
XRCC3-209ENST00000554913 UFC1Q9Y3C8 167 aa12.75□□□□□ -0.37
XRCC3-209ENST00000554913 IGHV7-4-1A0A0J9YVY3 117 aa12.74□□□□□ -0.37
XRCC3-209ENST00000554913 ATP6V0E1O15342 81 aa12.74□□□□□ -0.37
XRCC3-209ENST00000554913 ATP5LO75964 103 aa12.74□□□□□ -0.37
XRCC3-209ENST00000554913 NRACQ8N912 160 aa12.74□□□□□ -0.37
XRCC3-209ENST00000554913 CCDC140Q96MF4 163 aa12.74□□□□□ -0.37
XRCC3-209ENST00000554913 SPTBN1Q01082 2364 aaKnown RBP12.74□□□□□ -0.37
XRCC3-209ENST00000554913 LINC01548A6NM66 108 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 OOSP1A8MZH6 123 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 G3V318 75 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 MINOS1Q5TGZ0 78 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 MAPKAPK5-AS1Q8N8E1 139 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 SLC50A1Q9BRV3 221 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 RAXQ9Y2V3 346 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 MINOS1-NBL1R4GNA1 71 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 CCL21O00585 134 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 GOSR1O95249 250 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 PSMG4Q5JS54 123 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 C1orf122Q6ZSJ8 110 aa12.73□□□□□ -0.37
XRCC3-209ENST00000554913 PHLDA1Q8WV24 401 aaPredicted RBP12.73□□□□□ -0.37
XRCC3-209ENST00000554913 NHP2Q9NX24 153 aaKnown RBP12.73□□□□□ -0.37
XRCC3-209ENST00000554913 C11orf71Q6IPW1 123 aa12.72□□□□□ -0.37
XRCC3-209ENST00000554913 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
XRCC3-209ENST00000554913 RAB9AP51151 201 aa12.72□□□□□ -0.37
XRCC3-209ENST00000554913 EFNA4P52798 201 aa12.72□□□□□ -0.37
XRCC3-209ENST00000554913 LAGE3Q14657 143 aa12.72□□□□□ -0.37
XRCC3-209ENST00000554913 TMEM78Q5T7P6 136 aa12.72□□□□□ -0.37
XRCC3-209ENST00000554913 PIEZO1Q92508 2521 aa12.72□□□□□ -0.37
XRCC3-209ENST00000554913 PRSS47A8MTI9 375 aa12.71□□□□□ -0.37
XRCC3-209ENST00000554913 CEND1Q8N111 149 aa12.71□□□□□ -0.37
XRCC3-209ENST00000554913 MYOZ3Q8TDC0 251 aa12.71□□□□□ -0.37
XRCC3-209ENST00000554913 C8orf86Q6ZUL3 223 aa12.71□□□□□ -0.37
XRCC3-209ENST00000554913 AGRNO00468 2067 aa12.71□□□□□ -0.37
XRCC3-209ENST00000554913 TM2D2Q9BX73 214 aa12.7□□□□□ -0.38
XRCC3-209ENST00000554913 SPANXN1Q5VSR9 72 aa12.7□□□□□ -0.38
XRCC3-209ENST00000554913 AJUBAQ96IF1 538 aa12.7□□□□□ -0.38
XRCC3-209ENST00000554913 SIRPDQ9H106 197 aa12.7□□□□□ -0.38
XRCC3-209ENST00000554913 COL12A1Q99715 3063 aa12.69□□□□□ -0.38
XRCC3-209ENST00000554913 SPRY2O43597 315 aa12.69□□□□□ -0.38
XRCC3-209ENST00000554913 RPL24P83731 157 aaKnown RBP12.69□□□□□ -0.38
XRCC3-209ENST00000554913 A0A087WX48 190 aa12.68□□□□□ -0.38
XRCC3-209ENST00000554913 H3BVH4 76 aa12.68□□□□□ -0.38
XRCC3-209ENST00000554913 PRR9Q5T870 116 aa12.68□□□□□ -0.38
XRCC3-209ENST00000554913 AKAP6Q13023 2319 aa12.68□□□□□ -0.38
XRCC3-209ENST00000554913 TMEM238LA0A1B0GVL6 79 aa12.68□□□□□ -0.38
XRCC3-209ENST00000554913 IGF1P05019 195 aa12.68□□□□□ -0.38
XRCC3-209ENST00000554913 METTL26Q96S19 204 aa12.68□□□□□ -0.38
XRCC3-209ENST00000554913 TEX48A0A1B0GUV7 120 aa12.67□□□□□ -0.38
XRCC3-209ENST00000554913 J3KRW8 73 aa12.67□□□□□ -0.38
XRCC3-209ENST00000554913 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
XRCC3-209ENST00000554913 C9orf47Q6ZRZ4 202 aa12.67□□□□□ -0.38
XRCC3-209ENST00000554913 SRSF1Q07955 248 aaKnown RBP eCLIP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms